Fomitiporia mediterranea: FOMMEDRAFT_19740
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Entry
FOMMEDRAFT_19740 CDS
T03132
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
fme
Fomitiporia mediterranea
Pathway
fme04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FOMMEDRAFT_19740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_19740
Membrane trafficking [BR:
fme04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
FOMMEDRAFT_19740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Dynein_AAA_lid
Motif
Other DBs
NCBI-GeneID:
18677779
NCBI-ProteinID:
XP_007266138
JGI:
Fomme1_19740
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MALPAPVGDEAKMLSEAVGVVKVQTQQMRRFLETDQLMDALKSASTMLAELRTSSLSPKQ
YYELYMAVFDALRHLSTYLYEAHTQGRSHLADLYELVQYAGNIVPRLYLMITVGSVYMSI
PDAPVKEIMKDMMEMSRGVQHPTRGLFLRHYLSGQTRDHLPVGNDNGPVGNLQDSIAFVL
TNFIEMNKLWVRLQHQGHSRDREKREMERRELRILVGTNLVRLSSLDGVDLDMYQRIILP
HILEQIVNCRDVIAQEYLMEVVIQVFTDEFHLYSLGPFLSATAQLQPSVNIKQIVIALID
RLAAYAAREAENENPEETKHQEEAAARRLAEKVKEQKAKARINGASMASPPSATSDDAGW
GATSPTADAEKSFEDMTLNNGEAAEVNGVKSPTDEKGKEKAEPEVPMKKFRGIPENVKLF
EVFWHQIVELIKARPDLSIQDITALLVSLMNLSVSCYPDRLEYVDQILGFASEKIKEFSD
SPDLHAMQTTNNLASLLIAPINSYQSVLTLLALPRYANLLVLQPFSTRRSLSHAIVASVL
KNETIIETPEDVRGVLDLCQVLIRDQLDTVPGKQAAQPVRRPPYVADREEMAEEQGWVAR
MIHLFRTDSLDVQFELFQEARRHFEGGGERIRYTYPALITNAIKLCRRYKAREQEDEDWQ
SKVSTIIKFVRQLTSILFTQIEAPAIALRLFLLAAQVSDECGFEDLTYDLYVQAFTVYEE
SISDSRAQLEAVTLIIGTLQNAKVFSVDNYDTLITKAALHGAKLLKKPHQATAIHLASHM
FWQEAPNGEVPESRPEAGSDAEGTDGPRAYPHQDSKRVLECLQKSLRIANSATEEIVTVQ
LYCDALDQYLYYLDHKAPAVTPKFVNSLVDLITSSIDNVSSPDVHPSQRAPPALIEGVQT
PEMIVRHFRNTLVYVQTRKNAADVDPRWDEVDVVGAVLKMGLGQDAVGR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaccagcaccagtaggcgacgaggcgaagatgctgagcgaggcggtcggtgtc
gtcaaagttcaaacgcagcagatgaggaggtttctggaaaccgaccagctcatggatgct
ttaaaatccgcgagcacgatgctggctgagttgcgcacatcttctctttctccgaaacaa
tattacgagctttacatggctgttttcgacgcgttaaggcacctctcgacatatctctac
gaggcacatacgcaagggagatcccacctcgcggacctgtatgaacttgtgcagtatgca
gggaatattgtgccacggctgtacctcatgatcaccgttggctctgtatacatgtctatt
ccggatgcaccagtgaaggaaattatgaaggacatgatggaaatgtccagaggtgtacaa
catccaacaagaggtcttttcctgcgccactatctgagtggacaaacgagagaccaccta
cctgtaggcaacgacaatgggcctgttggaaatctacaagactccattgcctttgtttta
actaatttcatcgaaatgaacaaattatgggtacgcttgcagcaccagggccactctcgg
gaccgtgaaaaacgcgaaatggagcgacgggagctgcggatacttgttggaacgaacctt
gtccgtctcagctctcttgacggtgtcgaccttgatatgtatcagcgaatcatacttccg
catatccttgaacaaatcgtcaactgcagagacgtcattgcgcaggagtacctcatggag
gttgtcatccaggtgtttaccgatgaatttcacttatactcgcttggccccttcctgtct
gcaactgctcagctccagccatcggtgaacatcaaacagattgtcattgcactcattgat
cggctcgctgcatacgctgcgcgcgaagctgagaacgagaatccagaggagacgaagcat
caggaggaagcagccgcgcgacgacttgcagagaaagttaaggaacagaaagctaaagca
cgtataaatggtgcaagtatggcctctccaccgtccgcaacgtctgatgatgcaggatgg
ggtgcaactagcccgactgctgatgcggagaagtcatttgaagatatgactctgaataat
ggggaggcagcagaagtcaacggagtgaagtctccaactgacgagaagggaaaggagaag
gcagagcctgaggttccaatgaagaagtttaggggcatcccggagaacgttaaactattt
gaggtcttctggcatcaaattgttgagctcatcaaagcaagaccggatttatcgatacaa
gatatcacagcattgcttgtatctctcatgaacctctctgtcagctgctatccagatcgt
ctagaatatgtcgaccaaatcctgggcttcgccagcgaaaaaatcaaagaattttcggac
agccccgacctacatgctatgcaaacgaccaacaatctcgcctcactcctcattgctcca
atcaactcctaccaatctgtgctcactcttctagctctccctcgttatgcaaatctcctc
gttctgcaaccgttctcgactcggaggtcactttcacatgctatcgttgcgtccgtactg
aagaacgagacgatcatcgagaccccagaagatgttcgcggtgtattagacctttgtcaa
gtactcatacgcgatcaactggatactgtacccgggaaacaggcagctcaacctgtgagg
cgacctccatatgttgctgatcgggaagagatggccgaggagcaaggttgggtggcaagg
atgattcatctattccgaacagactctctggatgtacaattcgagctcttccaagaagct
cgaagacatttcgagggtggaggagagaggatacgatatacgtatccggccctaattaca
aatgctattaaactatgtcgaaggtacaaagcgcgggaacaagaggacgaagactggcaa
tcgaaggtctcaaccattatcaagttcgtacgacaattaacctcgattcttttcacacaa
atcgaagcacctgctattgctctgcgacttttcctccttgccgctcaagtctccgacgaa
tgtgggttcgaggaccttacgtacgacttgtacgttcaggcatttacagtgtacgaagaa
agcatctcggacagtcgtgcacaactagaggccgtcacattaattatcggcacgttacag
aacgccaaggtgttcagcgtggataattatgataccctaatcacgaaagcggcgttgcac
ggtgcgaaattgctcaagaagccgcatcaggcaacagcgatccaccttgcgagccatatg
ttctggcaggaggcaccaaacggtgaagtacctgagagccgacctgaagcaggatctgat
gctgaggggactgatggacctagagcttacccgcaccaggacagcaaacgtgtcctcgaa
tgcttgcaaaagtcattgcgcatcgcgaactccgcaacggaggaaatcgtaaccgtccag
ctgtactgcgatgcgctggaccaatatctttactatctcgaccataaggccccagctgta
acgccgaagttcgtcaacagcttagtagacctaatcacatcaagtatcgacaacgtctcg
tcgccagacgtgcacccatcgcaacgagcacctccagctctcatcgaaggcgtacaaaca
cccgaaatgatcgtacgacacttccgtaacacccttgtatacgttcagactcgcaagaac
gctgcggacgtagacccacgatgggatgaagtcgacgtcgttggtgctgtgcttaaaatg
ggtttaggacaggatgcagtcggtcgataa
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