Fomitiporia mediterranea: FOMMEDRAFT_20123
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Entry
FOMMEDRAFT_20123 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_20123
Enzymes [BR:
fme01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
FOMMEDRAFT_20123
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
FOMMEDRAFT_20123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR_1
UBA_ARI1
IBR
Ariadne
IBR_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
ANCHR-like_BBOX
zf-RING_2
RING_XB3-XBAT31
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
18677833
NCBI-ProteinID:
XP_007266633
JGI:
Fomme1_20123
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MSSDYDVSDDENEYYDGMDMDDDDDMNTQDDAISEEEMDIEMHKGTITSEGKRKACEVEF
DTMPQESVEALIRKEVDHITSIFGVSSDVASLLLRHMEWNKERLIEKYMDDPSEINVKAG
VSVAPPPSPPAASSGRIPNSRSKSFASSVAKQRTTRRIPAESASRTKPASEPPVQPQPTV
CQICFDDEQTEMSCLSCGHKFCNDCWGSFLRSKIREEGEMNVRCMASDCSLIAPDSFIYS
TLASDEDTIKRHQELIVRHYVGCNKNLKFCPYPSCNYTVFCPAAATKAALTTIVPTVRCG
ASDKHTFCFGCSIDTDHRPVICPVARLWLKKCQDDSETANWIKSNTKECSKCQSTIEKNG
GCNHMTCKKCKYEFCWVCMGPWSEHGTSWYNCNRYDESSGVEARDAQARSRASLERYLHY
YNRWANHEQSAKLSVDLYAKTEKKMEEMQITSNLTWIEVQFAKKAVDEVFKCRMTLKWTY
AMAYYLAKGNMKELFEDNQRDLERAVEDLSELLESPIEADNIPALRQKMQDKTVYVHKRN
EIMLEDTAEGFLEGRWTWNVDVEGF
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggactacgacgtctccgatgacgagaacgagtactacgatggcatggatatg
gatgacgacgatgacatgaacacccaagatgatgcaatctcagaggaggagatggacatt
gagatgcataaaggcactattacatcggaaggcaagcgcaaggcctgtgaggtagaattc
gacacgatgccgcaggaatccgtagaagcgcttatccgcaaagaggtggaccacataacc
agcatcttcggtgtctcaagcgacgttgcctccttattattacgacacatggagtggaac
aaggagcgcctgattgagaagtacatggatgatccgtcggaaattaacgtaaaggcgggt
gtttccgtcgctccgccgccatcgcctcccgcagcatcctcaggacgaataccaaattca
cgatccaagtcgtttgcgtcctctgtggcgaagcaacgtaccacacgacgtattcccgct
gagtcagcttctcgaacgaaaccagcttctgaaccgccagttcaaccgcagccaacagtc
tgccagatctgctttgacgatgaacaaacagaaatgtcctgtctttcttgtggccacaag
ttttgcaatgactgttggggttctttcctacggagcaagattagagaagagggcgagatg
aatgttcgctgcatggcttcagactgttctttgattgccccggattcgttcatttatagt
accttggctagtgatgaggatactatcaagcgccatcaagaattgatcgtgcgacactat
gtcggatgcaacaagaatctcaagttctgtccctacccgagctgtaattacacggtattc
tgcccggcagcagccaccaaggcagctctcactacaattgttccgactgtgcgctgtggc
gcgtctgataagcatacattctgctttggctgctccatagacacagatcataggcctgtt
atctgtcctgttgcgagactctggctaaagaaatgtcaggacgacagcgagactgcaaac
tggattaaaagcaacacgaaggagtgtagcaagtgccagagcacaattgaaaagaatgga
ggatgcaatcatatgacgtgcaagaaatgcaaatatgagttctgctgggtctgcatgggc
ccatggtcggaacacggtacatcatggtacaattgcaatcggtacgacgaatcgtctggt
gttgaggctcgcgatgcacaagcacgaagccgagcatctctagagcggtaccttcactac
tacaaccgctgggcgaatcacgagcagtcggccaagctctccgttgatttgtacgcaaag
acagaaaagaagatggaggagatgcaaattacttctaatcttacctggattgaggtccag
tttgcaaagaaggctgttgacgaggtgtttaagtgccgaatgacgttgaagtggacgtat
gccatggcatattaccttgccaagggcaatatgaaggagctgtttgaagacaatcagaga
gatctcgaacgtgccgtcgaagatctctcagaacttttggaatcgccgattgaagccgac
aatatccctgccctgcgacagaagatgcaggataaaacggtttatgtgcacaagcgtaac
gaaatcatgttagaagacaccgctgagggcttcctagaaggcagatggacgtggaacgta
gacgttgaaggcttttga
DBGET
integrated database retrieval system
