Fomitiporia mediterranea: FOMMEDRAFT_20213
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Entry
FOMMEDRAFT_20213 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00450
Selenocompound metabolism
fme00970
Aminoacyl-tRNA biosynthesis
fme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FOMMEDRAFT_20213
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FOMMEDRAFT_20213
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fme01007
]
FOMMEDRAFT_20213
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_20213
Enzymes [BR:
fme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
FOMMEDRAFT_20213
Amino acid related enzymes [BR:
fme01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FOMMEDRAFT_20213
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FOMMEDRAFT_20213
Prokaryotic type
Other AARSs
FOMMEDRAFT_20213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Motif
Other DBs
NCBI-GeneID:
18677845
NCBI-ProteinID:
XP_007266752
JGI:
Fomme1_20213
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MIIARTRWLNASSKCALGVVRGRQVYSRRWFADRVADRIEAPPHFTLPSTPERRTYPARL
ESRVKPYYVTTPIFYPNAAPHIGHLYSLVIADIFARHARLTSRSRTVKFVTGTDEHGLKI
QKAAQERNMQPQEFCDRLCVSFSGLARQANISHTKFVRTSSEEHCHGVQSLWTRLMNSGH
IYLGEHSGWYSISDECFYTDSQIRTAVDPKTGTEVKVSAETGNVVEWTKEQNYKFALSKF
KAPLLEHFQANPNAIYPPSQRQEIMDILESDDPKALTDLSISRPTWRLKWGIPVPDDSSQ
TIYVWLDALASYLTGIGYPWIDTADMVSSGWPVNLQIIGKDILKFHAIYFPAFLMALDMP
LSRALLSHAHWTVKKAKMSKSVGNVIDPVAILKDHGVDEVRWYLARTGGYFKADVDWNDD
QLVKSTNELRSLLGNVLLRLQSKKMLHRLPAAYQSVPLHRGILLTRGNAPMHLFEPGSEE
YDDRLEDERYAYEAIKEEAQANYVKEYTDRLARPRDVYGLISERTPGVVRYSELPEPDAT
GEALIVSAELREALNMLRGKVSYHLQRFEVGEATQSIVGVLSLLNKEITRIRPWSADTRP
RDVLHLLAWARETLRICGILLQSFMPTASQALLDALRVHPGARTYAYATIGVGRVRPGPM
KKTVLFPPTVERTLQHVEADHKHDENKQRKESYKALKDGRPI
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattattgctcggacgcgatggctcaacgcgtctagcaaatgtgcacttggcgtcgtg
agagggcgtcaagtgtactcccgtcgatggtttgcagaccgtgttgcagatcgtattgaa
gctcctccacacttcaccctgccttccacgccagagcgacggacatatccagcaaggtta
gagtcaagagtcaaaccgtactatgtcactactcccatattctacccgaatgctgctccg
catattggacacctttattcgcttgtcatagcagacatctttgcacgtcatgctcgtctt
acctcgcgctctcgtacagtgaaattcgtcactggtacggatgagcatggtttgaagatt
cagaaggctgctcaggagcgtaacatgcaaccccaggaattctgcgatcgcctttgtgtt
tcttttagcggtttggcacgacaggcgaatatttcgcataccaagtttgtccgtacgtcg
tcagaggaacactgtcacggtgtacaatcactttggacgaggctcatgaattccggacat
atttacttgggcgagcacagcggctggtattcaatttcggacgaatgtttttataccgat
tcgcaaatccgtactgcagtcgatccgaaaacgggcacagaagtgaaagtatccgcagaa
acgggcaacgttgtggagtggacgaaggagcagaattataaatttgcgctttccaaattc
aaagccccgctcctagaacactttcaggccaatccgaatgctatctaccctccgagtcag
cgacaagaaattatggacattctcgaatctgacgatcccaaggcactcactgatttgtca
atatctcgaccaacctggcgattgaaatggggtattccagtgccggacgactcttctcaa
accatctatgtttggcttgatgctctagcgagctatcttaccggaattggctatccgtgg
attgatacagctgatatggtttcaagcggttggccagtgaatctccagattattgggaaa
gacatactaaagttccacgccatatactttcctgcttttctaatggcgcttgacatgcca
ttgtcgcgtgctttgctttctcacgcgcattggactgtcaagaaggccaagatgtctaaa
tccgttggaaatgttattgatcccgtagccatccttaaggatcatggggttgatgaagtg
agatggtacttggctcggactggtggttatttcaaggccgatgtcgattggaatgacgat
cagcttgtcaagtctacgaacgaactgagatcattgctcggcaatgtgctgttacgctta
cagtctaaaaagatgttgcataggctacccgccgcataccaaagtgttccgttacaccgt
ggtattctcttaacacgtgggaacgccccaatgcacttgtttgaaccaggttcggaagaa
tatgatgacagattggaggacgagcgctacgcttatgaagcaattaaggaagaggcgcaa
gccaattacgtgaaagagtacactgacaggctcgcacgccctcgagatgtttatggccta
atatcggagaggactccaggcgtcgtccggtactcagaactaccagaaccagatgcaact
ggcgaggcactcatagtttctgcggagttacgcgaggcactcaacatgctgcgcgggaag
gtctcgtatcacttacagcgatttgaagtgggtgaagcaacgcaatcaatcgtcggcgtc
ttgtctctgttaaataaggagatcactcgaattcgaccatggtctgctgatactcgaccg
cgagacgtccttcaccttctggcctgggcccgggagacattgcggatttgtggaatatta
ttgcaatctttcatgcctaccgcttcccaagctcttcttgacgcacttcgtgtccaccct
ggagctcgtacgtacgcatatgcgactatcggcgtgggccgtgtgcgccctggcccgatg
aagaaaactgttctcttccctccgacggttgagaggacgctacagcatgtcgaggcagat
cacaagcacgacgagaataagcagagaaaagagagctataaggcactcaaggacggtagg
ccgatttag
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