Fomitiporia mediterranea: FOMMEDRAFT_20372
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Entry
FOMMEDRAFT_20372 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
fme
Fomitiporia mediterranea
Pathway
fme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOMMEDRAFT_20372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_20372
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_20372
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
FOMMEDRAFT_20372
Coactivators
SAGA/TFTC/STAGA complex
FOMMEDRAFT_20372
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
FOMMEDRAFT_20372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFII55_N
DUF4032
Motif
Other DBs
NCBI-GeneID:
18677873
NCBI-ProteinID:
XP_007266915
JGI:
Fomme1_20372
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MASGSSFLGPYDRELDSDDEDLSFEEQFILRFPPGEDLEKLRKMVSARETSNDVWIKFKD
SRRAVFHIGNNLYTAKLVDLPCIIESQKTLDNKQMFKVSDICQMLVVDDKIDSEDAVANQ
KGFNLDDFIWPHGITPPLHHVRKRRFRKRINRRTIETVEQEVERLLEEDAKANQIEYVVL
ENVNPDLSDSEFMEQDESRESAMRGSDAIDMPTPGPGAEDSGMEDDEGEIDEELAAELDL
ALGDEGDDGDEGDEGDEDEEDVSDEEDEDEDEDDETVQARRLLNEEIRDLEAAVAKKNAE
IASSANPIIKRRFEDALRKLQADLDSKLLQRDELYEQQRMRKEGFVPPRGESEPNEDDDG
GMDVD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggtcgtctttcctcggtccatatgaccgagagctcgactctgacgacgaa
gacctgtcatttgaggagcaatttattcttcgatttcctccaggcgaggatttagaaaaa
cttaggaaaatggtttctgcacgcgagacaagtaacgatgtatggatcaagttcaaagat
tcgcgcagagcggtctttcacatcgggaataatctttacaccgcaaagctagtcgacctt
ccctgtattatagaatctcaaaaaacacttgacaacaaacaaatgttcaaagtctcggac
atttgtcagatgctcgtcgtggatgataagattgactctgaagatgctgtggctaatcaa
aaaggcttcaacttggacgacttcatctggccgcatggtattacaccgccgctgcatcat
gttcggaaacgacgatttcgaaagcggatcaataggcgtaccattgaaacggtggaacaa
gaggttgagcgtctgttggaggaagacgccaaagcgaatcagattgaatatgttgtgctg
gaaaatgttaatccagacctttccgactccgagttcatggaacaagacgaatctcgcgaa
tctgccatgcgaggctcagatgccatcgatatgcctacgccaggtccaggggctgaggat
tccggtatggaagacgatgaaggtgaaattgacgaggaacttgctgctgaacttgacctt
gcactcggtgacgagggcgatgacggggatgaaggggatgagggagatgaagatgaagag
gatgtcagcgatgaggaagatgaggacgaggacgaggatgatgagacggtacaagctcga
cggttgttgaatgaggagatacgtgatcttgaagctgctgtcgccaagaagaacgccgaa
attgccagctctgctaacccaataattaagcgacggtttgaagatgcacttagaaagctt
caggctgatctcgactccaaacttttgcagcgggatgagctatacgagcagcaaagaatg
cgcaaggaaggatttgtccctcctcgtggagaatcagaaccgaatgaagatgacgacggt
ggtatggacgtggactag
DBGET
integrated database retrieval system
