Fomitiporia mediterranea: FOMMEDRAFT_22413
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Entry
FOMMEDRAFT_22413 CDS
T03132
Name
(RefSeq) Piwi-domain-containing protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_22413
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_22413
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
FOMMEDRAFT_22413
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FOMMEDRAFT_22413
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
FOMMEDRAFT_22413
microRNA pathway
RISC loading complex
FOMMEDRAFT_22413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoL1
PAZ
ArgoN
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18678177
NCBI-ProteinID:
XP_007269444
JGI:
Fomme1_22413
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MDNPRGRGRGRGGPRGGGGQRGGPGPRGAPPSAPGRGFGRGRGGPAPVQVFALGGTAQLD
ARLSDRELTALVSKFSNLSTSVPDRVVRPGFGKRGTAITLRANFFALKYPKNCVLYDYPI
EITPSVKKEEKRLRKRLFDLFESSQDVAPYLGGIAHDRMQRLIARALLPEDFTVTIAFYE
EGQAGPRPGAKEYVISLLEPRELRSADLDRYLQGDDAQYNPLDIISAFNLITSSHATHTG
VSVGKNRYFFPPNSLNESPFQLGSGLEAWKGFFSSVRPVYKSLMVNVNVCMSAFYVPHSR
LSDAILEFARQSRGASPQELYGRVRVTTTHLGYRRRYSIKAFGPQTARKTVFQCEEYGGQ
ISVEQYFQRKYKVKLSHADDMPVINIGNKTKDVYVPAEVCEIEPGQSYNGTLSDRQTAEM
IKAACNSPPVNAQAISNQGLNVLGLRQRATPMTGFGVEISTEFTVVPARVLTPPRVMYQS
GQPSVANGSWNILGVRFSRPAQLTRIAILVLNDGGREDFQSNSDPDLRNVVTGFLAKCRN
SGMQVDSALPPLLFLRLPRLNFQRDRFRTEAIAQIESSIKSLPSKPNMILVFMTGKDPDI
YPGLKKLCDMKLGIPTLCMIMSKVRKERGQDQYFSNIALKVNAKLGGINHQIHPDSLKWL
KNTMLVGMDVTHPGIGCVKGTPSIAAVVASCDTNFMHYPVSLRLQEHRKEMITDVKDMMI
ERLAEYNKRMKAYPERVIVFRDGVSEGQFDQVLLKELPEIKKAFKSFKNYNPKLTISICG
KRHHTRFYPTKPEDADRTSNTKAGTVVDKGVTAVYDFDFYLQAHAGLQGTVRATHYTVVY
DENKFPADDLQQGANDVSYLWARATKSVSLIPPAYWADRACERGKHYLHGILPPPKNSPE
SRMDEQQISRKAQEMWGNGIHENLKGTMFYL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggataatcctcgtggaagaggtaggggccgaggtggacctcgaggcggtggcggccaa
cgtggaggtccaggaccccgtggtgcaccaccatctgcacctggccgtggctttgggcgc
ggcagagggggtcccgccccagtgcaggtgttcgcactgggcggaactgcacagttggac
gctcggctcagtgatcgtgagctgactgcgcttgtctcgaaattcagcaatctatcgaca
tcggtgcctgatcgcgtcgtacgtcccggattcgggaaacgcgggacagcaatcacgctc
cgcgcgaatttctttgcgttgaagtatccgaagaactgcgttctgtacgattacccgatt
gaaatcacacctagtgtgaagaaagaggagaagcgtttgcgaaagcgccttttcgacttg
tttgaatcgtcgcaggacgtcgcaccatatcttggaggcattgcccatgacaggatgcaa
cgcctcattgcaagggcactgttaccagaggacttcaccgtaacgattgccttttatgag
gaaggccaagccggacctcgtcccggtgcaaaagagtacgtcataagcctgttagagccg
agggaacttcggtcagcagaccttgaccggtaccttcaaggagatgatgcacaatacaac
ccattggatatcatttcagctttcaacctaatcacttcctcccatgcgacgcatactgga
gtctcagtaggaaagaaccgctatttctttccacccaactcactgaatgagtcgcccttc
caactcggaagcggtttggaagcttggaaaggcttcttctcgagcgtccgtccggtctac
aagagcctcatggttaatgtcaacgtttgcatgagcgctttttacgttccgcattcacgg
ctaagcgatgcaatactcgaatttgcgaggcagtcgagaggtgcatcgcctcaagagcta
tatggtcgtgtacgcgtcacgactacacatttaggatatcggaggagatatagtataaag
gcgtttggaccgcaaactgcaaggaagaccgtgttccaatgtgaggaatacggtggccaa
atcagtgtcgaacagtactttcaacgcaaatacaaagtaaagctgagccacgccgacgac
atgccagtcatcaacatcggcaacaagacgaaagacgtttatgtccccgccgaggtctgt
gaaatcgaaccaggacaatcctacaacggcacactctcagacaggcagacggcagaaatg
ataaaggctgcttgcaactcgcctcccgtcaacgcacaggcaatttctaaccagggtctt
aatgttcttggtttgcggcaacgcgcaacacctatgaccggcttcggtgttgaaatatct
actgagtttaccgtcgtccctgctcgggtccttaccccaccgagggtcatgtatcagtcg
ggccagccgagcgttgcgaatggctcgtggaacattctcggtgtgcgattctcgagaccg
gcgcaactcactcgcatcgcaatacttgtattgaacgacggcggtcgtgaagacttccag
agcaattccgatcccgatttacgtaacgttgtcaccggtttcctcgctaaatgtcgcaat
agtggtatgcaagttgacagtgctcttcctccgttgcttttccttcgactcccgagacta
aactttcagcgggatcgcttccgtaccgaagcaattgcacaaatcgagagctccatcaag
tcccttcccagtaaaccaaacatgattcttgtattcatgacaggcaaggatcctgatatc
taccccggactgaagaaactatgcgacatgaaactcggcattccaacactatgcatgatc
atgtcgaaagtacgtaaggagcgcggccaagaccagtacttctccaacattgcactcaaa
gtgaatgcaaaactcggcggcatcaaccatcagatccacccagattctctcaagtggttg
aagaacacaatgctcgtcggaatggacgtgacacatcctgggatcggttgtgtaaaagga
acaccctcgattgctgcagtcgtcgcatcgtgcgacactaatttcatgcattatccagtc
agcttgcgtctgcaggaacaccggaaagagatgattaccgatgttaaggatatgatgatc
gaacgattagcggaatacaacaaacgtatgaaggcttacccggagcgcgtcatcgttttc
cgtgacggtgtctccgaaggccagtttgaccaagtgctcctcaaagaactacccgagata
aagaaggccttcaagtccttcaagaactataatccgaagctaactatctcaatttgcgga
aaacgtcatcatactcgcttctatccaactaagccagaggacgccgataggacgtcaaac
accaaagccgggacagtcgttgacaaaggcgttacagcggtatacgattttgatttctat
ttgcaggcacacgctggactccagggcacggttcgtgcaacgcattacacagtcgtctac
gacgagaacaagttcccagcagacgatctccagcaaggtgcaaacgatgtcagttacttg
tgggctagagcgacgaagagcgtgagtttgattccaccagcgtactgggcggatcgcgct
tgcgagcgcggaaaacactacttgcacggtattcttcctccgccgaaaaatagtccggag
agcaggatggatgagcagcagatatctaggaaggcgcaggaaatgtgggggaacggtatc
cacgagaatctgaaaggcacaatgttctacctataa
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