Fomitiporia mediterranea: FOMMEDRAFT_29840
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Entry
FOMMEDRAFT_29840 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K16578
CLIP-associating protein 1/2
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_29840
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fme04812
]
FOMMEDRAFT_29840
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
FOMMEDRAFT_29840
Cytoskeleton proteins [BR:
fme04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
FOMMEDRAFT_29840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EZ
XMAP215_CLASP_TOG
Cnd1
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
18678936
NCBI-ProteinID:
XP_007268345
JGI:
Fomme1_29840
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MDSHDLEKLISQCKSSDVDAKIDAVTKLQKLFETGLSDADGLVNALKACLRTSNQHLTSA
TLAALPPFFPLITTGKLNDPDDSVDVHILRQILTAFLPSGGLLDRLGDRSERSREKARES
MVVLGGLALRNSPSLLSLSASSKSRDAGKGPETPLMIWERCLREGGLQSKVWRVREQAIL
TLVDVRRVHPMLPLKPYLLPLVELLEDTDGTVRESARQAVVELFTGPTVTDAARADLKKE
MTKKNVRKTIVDSVLQKLMSGGTRPASAAGSHGHSEAGSEPSEPPAKKGYIPPSLKLQGR
QPTSSTTHSTLSGSGSKATSIADITSRPASRLGGDLPATPVAEPSDVAAVYVASVKDLED
EFTGMLKHFEGKETEHNWAGRERSIQRVRGMLKGEVHIRYFDTFLGCLKADFIDASFKTL
ASLRTTVAVNTCHLYSEMATSLGSAMDGFCEAILTRLISMASLTKKIVAIQSQQVADVVV
TNTTPHPKMYLNLIWHAVQDKNISSRQYGINHLKVFLEIHGQRCKHIIETGGSQDVLEKI
FKKALGDSNPGVRESARSTFWAFEGIWQERGSVLMASLDATAKKQLEKACPEAGRVTVPV
TPQVKKSSVAAAIAASRAKAKAIANAPPSLRHQATSASHILQRSTSPTPRSLSLSQSTPS
PKEGLYTIRRPSGTRPLSPLSPPARKSTSFSPTSSSSGYPVSPAVHNRTRSTEVPASPSA
VHRRFASAQLSPPSSPSARDSSETTARAGLPPRNSLDGAFALPPSPTRQHRSRVPSSPTR
IPSPTRLSHAGRRSDIRTSLFSFANSTQNMNGADQSLLLAQSIPLPQDSDSDDDSHMMSF
STPFEKYHISAPKTNTSSLSAGSPPASAPKPIVEDALRARAEQAESAAERLLELNEPDDE
TSISPIPPSLLRSNGDTPKASAPLKPRSLDLTPSTPTNKKTALLRQAASFKDSPANKKSS
SLVDILRERKHETGWWLKRISLIDKGSPLKGSDQDTLFKELKQCISDLEDGMADASTLKK
LALLCSDNPVHDDSLDMDRTMWSKERIFDRMFDALMKFLTPEKTEEELEYGLIALWEILE
SQAPLAEGREAEVFTHLLQIRFCNSINVLEATNTIRDALVARIDPVYGLTMLHASLRTFR
AEPLVDTAKQEEKSASYAFGLIALGKFILRLPAEVLEDELSRLKTTLTTALSDTTSLVVR
ESAATCIIASQLVLRDETHLFTLLDGLPDEKKNLLTYLFDKHGARGNKEASGTERLEKEM
RRLDGRTNTPPRPK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatagtcacgacctcgaaaagctcatatcgcaatgcaagtcttctgacgtagacgcg
aagatcgacgcggtcaccaagttacaaaaactgttcgagactggcttgtcagacgcagac
ggactcgtcaacgcgctcaaggcatgtcttcggacatccaaccaacatttaacatcagcc
acgcttgccgctcttcctcccttctttccattgataacaacaggcaaactcaatgatccg
gatgactccgtcgatgtccatattctgcgtcagatactgactgcatttctgcccagcggt
gggctacttgaccgtctcggtgacaggagcgaacgttctcgcgagaaggcacgagagtcg
atggttgtcttgggagggctggcattacgcaactcgccatcgttgttgtctctatcggcg
tcttccaaaagcagagatgctgggaaaggtcctgagacgcctttaatgatctgggagcgg
tgcctacgtgaaggtggcctgcaaagcaaagtttggagggttcgagaacaggctatactt
acgcttgtggatgtgcgtcgtgttcatccgatgctcccactcaaaccctaccttttgccg
ttagttgagcttcttgaagacacagatggaactgtacgggaaagcgctcgtcaagctgtg
gtggagcttttcactggtccaactgtcaccgatgcagctcgcgcagatttgaagaaggag
atgacgaagaagaacgttcgcaagacaatcgtggactcggtgctccagaagcttatgtcc
ggtggaacgcgtccagcctcagcggcaggcagtcatggacatagcgaagcaggctctgaa
ccgagtgaaccaccagcgaagaaagggtatattccaccgagcctcaaacttcagggaaga
caaccgacttcctcaacgacacacagtactttgagcgggtcaggcagcaaagcgacgagc
attgctgatataactagccggccagccagtcgtcttggtggtgaccttcctgcaactccg
gtagcggagcctagcgatgtggccgcggtatatgtcgcatctgtaaaggatcttgaagat
gagtttaccggcatgttaaaacactttgagggtaaagaaaccgagcacaactgggcgggt
cgtgaaagatcaatacaacgagtccgaggtatgctgaaaggcgaagtgcacattcgatat
ttcgatacgtttcttggttgccttaaggcggattttattgatgcatctttcaaaacgctc
gcaagcctcaggacaaccgtggccgtcaatacgtgtcatttatattcggaaatggcaact
tcattgggctccgccatggacggtttctgcgaagcaatcttgacgcgcctaatcagcatg
gcctcgctcacaaagaagatagtcgcaattcaatctcaacaggtcgcagacgtcgtcgtg
acaaacacaacaccacatccgaaaatgtatctgaatctcatctggcatgcagtgcaggac
aaaaatatttcgtcccgccaatacggcatcaatcatctgaaagtgtttttggaaatacat
ggacaacgctgcaaacacattatagagacgggcggctcacaagacgttttggagaaaatc
ttcaagaaggctctgggagacagcaatccgggagttcgtgagagtgcacgatcaaccttt
tgggcctttgagggtatctggcaggaaagaggatcagttttaatggcttctctcgatgca
acggcaaagaagcagctagagaaagcatgccctgaagcaggtagggtgactgtgccggtc
actccacaagtcaagaagagcagtgttgccgctgcaatagccgcgagtcgtgcaaaggca
aaagcaattgccaacgctcctccatcattacgccaccaagcaacatcagcgtctcatata
cttcaaagatcaacgtcacctacgccaaggtcgctatcgctatcccagtccacaccgtct
ccgaaggaaggcctttacaccatacgcaggccttccggtactcgaccgctatccccgtta
tcccctccagctcggaaatcgacatctttctcacctacatcaagttcttccggatatcct
gtatcccctgcagtacataatcgcacgcgctcgaccgaagtaccagcgtcacctagtgca
gtccataggcgctttgcatctgcacaactcagtcctccctcgtcaccttccgctcgcgac
tcttcggagactacggcaagggctggtttgccacctcgtaacagtttggatggtgctttt
gcgctcccgccatctccaacacgccaacacaggtcaagggtaccttcttcacctactagg
ataccatctcctactagactatcacatgctgggcgaagatctgacattcgcacttccctc
ttttcatttgcgaacagcacccagaatatgaatggggcggaccaatctttactccttgct
caaagtataccgcttccacaggacagcgactcggacgacgattcccatatgatgtccttc
tcgacccccttcgagaagtatcatatctccgccccaaagaccaatacttcgagtctctcg
gctggatcgcctccggcaagtgctcccaagcctatcgtcgaagacgctcttcgtgctaga
gcagagcaggcagaaagtgctgcagaacgacttttggagctgaatgagcctgatgacgag
acttccatttctcccatacctccctcacttcttcgatcgaacggcgacactcctaaggcg
agcgctccgctgaaaccgaggtctctcgacttgacaccgtcaacaccgaccaacaagaaa
acagctctccttcgccaagccgcttcgtttaaagatagtcctgcaaacaagaaatcatcg
tcgctagtggatatcctgcgcgaacgcaagcatgagactggctggtggttgaagcgcata
tctctcattgataaagggagtcccttgaagggaagtgatcaggacaccctgttcaaggag
ctgaagcagtgtatatctgacttagaagatggcatggcggatgcttccacgctgaagaag
ctagccttgctgtgttctgataatccagttcacgacgattcacttgacatggaccgaacg
atgtggagtaaagagaggatatttgatcggatgttcgatgcattgatgaagtttttgaca
ccagagaagactgaagaggagctcgagtatggcttgattgcactctgggaaatccttgaa
agccaagcaccgctcgccgagggtcgtgaggcagaagtctttactcatttattacagatt
agattctgtaacagtataaatgtactggaggctacgaacaccattcgagatgcacttgtt
gcccgcattgatccggtctacggattaacgatgttgcacgctagtttacgcaccttccgc
gcggaacctctggtcgacaccgcaaagcaagaggaaaagtcggcgtcatatgcattcggc
ttgattgcgctcggtaaatttattctacgtttaccagctgaggtcttggaagatgaactt
tctcgtctgaagacgaccttaacaactgcattgagcgatacgacttcccttgtcgttcgt
gagtccgcagcgacatgtataatcgcttctcagctcgtcttgcgcgacgaaacgcatctc
ttcaccctcctggacggtcttccagacgaaaagaagaaccttcttacatatctttttgat
aagcatggtgcgcgtgggaacaaagaggcgagcggaaccgagaggctggagaaagagatg
cggcgtttggacggtcgtacgaacacgcctccacgaccaaaatga
DBGET
integrated database retrieval system