KEGG   Fomitiporia mediterranea: FOMMEDRAFT_30346
Entry
FOMMEDRAFT_30346  CDS       T03132                                 
Name
(RefSeq) coatomer protein
  KO
K17302  coatomer subunit beta'
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fme04131]
    FOMMEDRAFT_30346
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fme04147]
    FOMMEDRAFT_30346
Membrane trafficking [BR:fme04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    FOMMEDRAFT_30346
Exosome [BR:fme04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   FOMMEDRAFT_30346
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st PEP5_VPS11_N NBCH_WD40 Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_SCAP WD40_RFWD3 WD40_2 Beta-prop_LRRK2 Beta-prop_DCAF12 Cyt-b5
Other DBs
NCBI-GeneID: 18678964
NCBI-ProteinID: XP_007269011
JGI: Fomme1_30346
LinkDB
Position
Unknown
AA seq 858 aa
MFLDINRKLFQRSDRVKAVDFHPTEPWLMTGLYNGSVNIYNHETGALVKTFEVAEVPVRC
VRFIPRKNWFVAGSDDFQLRIFNYNTHEKVTAFEAHPDYIRCLAVHPTLSIVLTGCDDMT
IKAWDWDKQWKCIRVFEGHTHYIMNLVFNPKDTNTFASSCLDRTVKLWSLGSSTPNFTLE
AHEKGGVNYVEFYPGADKPYLLTTGDDRTVKVWDYLSKSCVQTLEGHTNNVSFAMFHPNL
PLIISGSEDGTVKIWNSGTYRLENTLSYALERAWCISIRPQANDVAVGFDEGVVVIRLGR
DEPAFSMDPSGKLIYTRNTEVLSANLQSAADSDVTEGQRIPISTREIGSTEIFATSLQHS
PNGRFVTVVGDGEYIIYTALAWRNKAFGSGSSFAWAGDSNTYAVLEGRTKVRLFKNFKEK
TGSALKGVGSWPIESLHGGTLLGARASGFVVFWDWESGEIVRRIDVESKNVSWSGTGSLV
AITSDESFYILRFNRDAYDAALESGAEIGDEGVEEAFEVIADVSESVKTCKWIGDCFIYT
NAANRLNYLIGSEAQTVTHFDNPMYLLGYIPTHNRVYLCDKDVRIYGYSLSLNLIEYQTA
VLRDDMDAAAEILPSIPKEQRNKVARFLEARDLKELAFQVTADPDHKFDLSLQLDDLDAA
LDIVRSLPETEAETKWKSVGDRALAVWRFDLARECFERAGDLSALMLLLLAIGDRDGLSK
LASQAEAKGQNNLAFACRLQLGDTDACVDLLVKTERAPEAALFARTYAPSLVPKAVTAWR
GELESKNRKKLAAAVASPAENPELFTEGWEEALEREKAVRAQGPGGLKVNGNGPISADSS
PSTQDAKTPESPSDDSDS
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgttcctggacatcaatagaaaattgttccagcgttcggaccgcgtcaaggccgtagac
ttccatccgacggaaccatggcttatgacaggcctgtataatggcagcgttaatatttac
aatcatgagactggggcgcttgtcaagacgttcgaggtcgctgaagtacccgtacgatgt
gtacgctttatccctcgcaaaaactggtttgttgccggctcggacgatttccagctacgc
atatttaattacaacacgcacgaaaaggtcaccgccttcgaggcgcatccagattacatt
cgatgtcttgctgttcatcccactcttagtatcgttctcacgggatgtgacgatatgacc
atcaaggcatgggactgggataaacagtggaaatgtattcgtgtcttcgaagggcatacg
cactatatcatgaaccttgtcttcaatccgaaggacaccaacacgtttgcaagctcgtgt
cttgaccgtactgtcaagctttggtcacttggctcgtcgactccgaacttcacattggag
gcacacgagaagggtggtgtaaactacgtcgagttctatcctggcgcggacaaaccgtac
cttcttaccacaggcgatgatcgcactgtcaaagtatgggattacctcagcaaaagctgc
gtgcaaacattggaaggtcataccaataatgtatcattcgcgatgttccacccgaatttg
ccactgatcatcagtggaagcgaggacggcacggtcaaaatctggaacagtggtacttac
cgcctcgaaaatactctcagctatgctctcgaacgtgcatggtgtatctctattcgtcca
caggcgaatgatgttgcagtcggtttcgacgaaggagtagtcgtaatcagacttggccgc
gacgaaccagcatttagcatggatccctccggaaaattgatttacacgcgcaacaccgaa
gtattgtccgcgaacctccagtcggctgcggacagcgacgtaaccgaaggtcaacgcatt
ccgatttctacgcgtgagatcggttcaacagagatctttgcaacatccttgcaacattcc
ccaaatggccgattcgtcactgttgtgggtgatggcgaatatatcatctatacagcactt
gcttggcgaaacaaggccttcggatcgggttcttcatttgcatgggctggagactctaac
acgtacgccgtgcttgagggtcggacaaaagttcgattattcaaaaacttcaaggaaaag
actggttcagccttgaaaggtgttggttcttggcctattgagagcttacatggtggcact
cttctcggtgcgcgagcgagtggttttgtagtcttctgggattgggagtctggcgagatt
gttcgacgaattgacgtcgaatccaagaacgtttcttggtctggcaccggcagcctcgtg
gccatcacttctgacgagtccttctacattcttcgattcaacagggacgcatatgacgct
gctttagagtctggagctgaaattggtgacgagggtgtcgaagaagccttcgaagtcatt
gcagatgtatctgagagtgtgaagacgtgcaaatggatcggcgactgcttcatctacacc
aacgcagcaaaccgactcaactacctcatcggtagcgaggctcagaccgtaacacacttc
gacaacccgatgtacttactcggctacatcccgacacacaaccgcgtatacctatgtgac
aaggacgttaggatctacggatattctctctccctgaacctcatcgaataccagaccgcc
gttctgcgcgatgatatggatgctgctgccgagatactcccttctataccaaaggaacag
cggaacaaggttgcacgcttccttgaagcacgtgacctcaaagaactggccttccaagta
accgccgacccagaccacaagttcgacctctcactacaactcgacgatctagatgcagca
cttgacatcgtacgctcattacccgaaactgaggcagaaacgaaatggaagtcagttggg
gaccgcgctctcgccgtttggcgcttcgaccttgctcgtgaatgttttgagcgagcaggt
gatctgagcgcgcttatgctcctcttattggctattggtgaccgagacgggttgagcaag
cttgcttcacaagctgaggcgaagggccaaaacaatttggctttcgcatgccggctccaa
cttggtgataccgatgcctgcgttgaccttctcgtcaaaactgaacgtgcacctgaggcg
gctctctttgcacgcacatacgcaccaagtctggttccaaaagctgtcaccgcctggcgc
ggcgagttagagtccaagaatcgcaaaaagctcgcagcagcagtcgcatcacctgcagaa
aatccggagctcttcaccgaaggatgggaagaagctcttgagcgagagaaagctgtacga
gcgcaggggcctggtggtcttaaggtgaacgggaacggacctatttccgctgactcttcg
ccgagtacgcaagatgcgaagacacctgaatcgccgtcggatgattctgattcgtag

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