Fomitiporia mediterranea: FOMMEDRAFT_72126
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Entry
FOMMEDRAFT_72126 CDS
T03132
Name
(RefSeq) WD40 repeat-like protein
KO
K14830
protein MAK11
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_72126
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FOMMEDRAFT_72126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
18679550
NCBI-ProteinID:
XP_007261469
JGI:
Fomme1_72126
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MGHAENEERASKKAKSANLPLKSALKKPKPTHPTKHAEEKHDVQEPILSQPRRSPINENL
AKKTKAVRRAPTPPLTKTKAKVDKGKAKAAVAPEPKIYPSTFKVVVGTYEKLLYGLEGSF
VGEDDTALERPSLKPIFIFPAHIACVKAVAASPDGGKWLATGSTDEIIKVWDLRRRKEIG
GLIQHEGSITYLGFPTRSHLVSASEDGTLCIFRARDWVLLRSMKGHKGRVNCVAVHPSGK
VGLSVGKDRTLRMWDLMRGKGSASTKLGKEGELVRWSTNGDRFVVQSSSTIDIYSVEMVL
LHTFTHPKRVQDVRFYRSTSGKEYLLVAAEDKKVTFYNTTSTDSTSLPIVAEAIGHQNRV
KAIAILGVATPHTAPERPWTTIMCTASSDGWIRIFDLIDLDSLDGTETGKDVKSLNAIAE
YDTKGSRLTCCTLADGEIPVSGVTGKRKHGEDEDSDDDTKKANEGLDVEEEHVDDASDED
EDEEDAENEKS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacgcagaaaatgaggaaagagcttcaaagaaggcaaagtctgccaacctcccg
ctcaaatctgctttgaagaaacccaaaccgacacatccaacgaagcacgctgaagagaaa
catgacgttcaagaacctatcttatctcaacctagacggtcgcctataaatgagaacttg
gcgaagaagacgaaagcggttcgaagggcccctacacctccccttactaaaactaaagcg
aaagtagacaagggaaaggcgaaagctgcagtagcgccagaaccaaaaatctatccatcg
acatttaaagtcgtcgttggcacttatgaaaaactattatacggcttggagggctcgttt
gtaggagaagacgatactgctttggaaagaccttcgttgaaacccatcttcatctttcct
gcgcatattgcttgtgttaaagctgttgctgcatctcccgatggcggtaaatggctcgcg
actggaagtacggacgagatcataaaagtctgggatttacggagacgaaaagaaattggt
ggactcatccaacatgaaggctcaatcacctatctcggtttcccgacccgttcgcatctc
gtgagtgcctctgaggatggcactctttgcatcttccgtgcacgagattgggttcttctg
cgttccatgaagggtcataaaggtcgcgtgaactgcgtagcagtgcatccttctggaaaa
gttgggcttagcgttggtaaagatcgtactctccggatgtgggacctgatgcgtggaaag
gggagtgcaagcaccaaacttggcaaagagggagaactcgtgcgatggtcaactaacgga
gatcgattcgttgtacaatctagttcaacaatcgacatctactctgttgagatggtattg
ttgcacacgttcacccaccctaaacgtgtgcaggatgtacgcttctatcgatccacctcg
gggaaagaatacctcctagtagcggcagaggataagaaagtaacattctacaatacgaca
agtacggacagtacatcgctacctatcgttgctgaagcaatagggcaccaaaatcgtgtc
aaagcaattgccattctcggcgttgcgaccccgcatacagccccagaacggccttggacg
acaatcatgtgcactgcctcatccgacggctggatacggatatttgacctgattgacctt
gattcattggacggcaccgagactggaaaggacgttaagtccttaaatgcgattgctgaa
tacgatacgaagggcagtcggctcacgtgctgtacacttgcggatggtgaaatacccgtc
tcaggggtaacggggaagcggaagcatggagaggatgaggatagtgatgacgacaccaaa
aaagcaaatgaagggctagatgttgaagaggaacatgtggatgacgcttcggacgaggat
gaagacgaggaggacgctgaaaatgaaaagagctag
DBGET
integrated database retrieval system