Fomitiporia mediterranea: FOMMEDRAFT_73021
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Entry
FOMMEDRAFT_73021 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K09650
rhomboid-like protein [EC:
3.4.21.105
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fme01002
]
FOMMEDRAFT_73021
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
fme03029
]
FOMMEDRAFT_73021
Enzymes [BR:
fme01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
FOMMEDRAFT_73021
Peptidases and inhibitors [BR:
fme01002
]
Serine peptidases
Family S54: Rhomboid family
FOMMEDRAFT_73021
Mitochondrial biogenesis [BR:
fme03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
FOMMEDRAFT_73021
Mitophagy factors
Parkin-dependent mechanism factors
FOMMEDRAFT_73021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
Motif
Other DBs
NCBI-GeneID:
18679576
NCBI-ProteinID:
XP_007261537
JGI:
Fomme1_73021
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MLQKLKEDLAGLPNSLTYPILWAYVQVANRFINASEGTRITYEICNMFVWVWLAWQLRFL
RPFMNKYFMHHPLSGRSVTLLTSIFSHHSFIHLLVNSFALLGFGSAATAYLVKRQQENSE
GVLESTPRYHFWALFITAGLVSALTSHIASTRIYFPMFLAELRASGAANSLATSVSTAFR
RVGGSVVKDKAAGRREILPSLGASGAIYAMVMITALAYPDAQVFLLFPPIPLPISWGVGA
MVTMDIVGILRGWRLFDHWAHLGGAGFGVLYYMYGPDIWNALRVIHRRRIQPSQQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaagctaaaagaagatcttgcggggttaccaaactccctaacataccccatt
ctttgggcatatgtgcaagttgcaaaccgcttcatcaatgcatccgaagggactcgcatc
acgtatgaaatttgtaatatgttcgtgtgggtgtggcttgcatggcagctccggtttctt
cgaccgttcatgaataagtattttatgcatcatccgttgtctgggcggagtgttacgctt
cttacgagtatattcagtcatcactcgttcatacaccttcttgtgaactcatttgcgctt
cttggcttcggctcggcagcaaccgcgtacttagtcaagagacagcaggagaatagcgaa
ggggtgttggagtcgacaccgaggtatcatttctgggcgttgttcattactgctggactt
gtctccgcgctcacctcgcacatcgcaagcacacgtatctacttccctatgttcctcgcc
gaactacgcgcatccggagcggcgaactccctcgctacgtcggtgtcaacggcatttcgg
agggtaggaggttcagtggtgaaggataaggccgcggggcgtagagagattctcccttcg
ttaggtgcttcgggcgcgatttacgcaatggtgatgattacagcgcttgcgtacccggat
gcacaggtcttcttactgttcccgcctattcccctgcctatcagttggggtgttggtgcg
atggtgacgatggatattgtgggcatcctccgaggatggcggctctttgaccactgggca
cacctgggtggcgctggctttggagtgctgtactacatgtacggaccagacatttggaac
gcactccgagtaatccatagacgaagaattcagccttcgcaacaataa
DBGET
integrated database retrieval system
