Fomitiporia mediterranea: FOMMEDRAFT_73501
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Entry
FOMMEDRAFT_73501 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K09191
general transcription factor IIIA
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fme03000
]
FOMMEDRAFT_73501
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_73501
Transcription factors [BR:
fme03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
FOMMEDRAFT_73501
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
FOMMEDRAFT_73501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_8
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
DUF7565
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-GeneID:
18679599
NCBI-ProteinID:
XP_007262542
JGI:
Fomme1_73501
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MASSSKTQVLNPPIIVGGKLIADGGKRYHCTFEGCTKSYRKPVRLEEHERTHTGERPFVC
TTCRKTYFRDSHLQAHMRTHMPDSSRSFACQFDGCEKKFWTPQHLKRHEETHSGEKPFKC
SELGCSQSFSKHNQLRSHISSVHCQSGTKNFRCEHEGCPKSFATSQKLKAHAKIHEDHRY
TCTHPACLSKSENEYFSAWSALQAHTRATHPPTCPYVSCNGKIFSQQKILRVHLKIHEQR
EAEQTLASTYRGDGCEADDEGEDRPSKRSRGGEVGRDWKCSESGCEKDFKSKKALATHVK
VAHMLRRDFVCTFEGCGASFGYKHLLQRHSARIHSIHGDSHGNLHSVVLDEVPAEGCTPL
KTLENSVIDVLTGKAYEDHAKRRLSATETLACPYPVIPGHKLETSSGLSSAPCKFVFSRA
YDLRRHLASAHALNIDREQATEVVKALRRAAKAPRSCIDGLDLYVWSLIYW
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcaagcaagacacaagtgcttaatcctcctattatcgtcggtggaaagctc
attgcggatggcgggaagcggtaccattgcacgtttgagggctgcacaaaatcctacaga
aagcccgttcgattggaggagcacgagcggacacataccggtgaaagaccttttgtatgc
acaacatgtcgaaagacctacttccgggatagccatttacaggcacacatgcggacccat
atgccagattcgtctcggtcatttgcatgccaatttgatggctgcgagaaaaagttttgg
actcctcagcatctcaagcgtcatgaggaaacgcactccggagaaaagccatttaagtgt
tcagaacttggatgctcccagtctttctcaaagcacaaccagctccgttcgcatatctcc
tcggttcattgtcaatcagggactaagaacttccgatgtgagcatgaaggatgtccaaag
agctttgctactagccaaaagctgaaggcacatgcaaaaatacatgaagaccaccgatat
acatgcactcatcccgcgtgtctatctaagagcgaaaacgaatacttctccgcctggagt
gcactacaagcacatacgagggcgacacatccaccaacttgcccttacgtttcctgcaac
gggaagatcttctctcagcaaaaaattcttcgagtgcatttgaaaattcacgagcagcga
gaagcagaacagactcttgcaagtacataccgaggagatggttgtgaagcagacgacgaa
ggtgaagatcgtccgagtaagagatccagaggtggtgaagtcgggagggattggaaatgt
tcggagagtggttgtgagaaggatttcaaatccaaaaaagcactagcaacacacgtcaag
gtcgcacatatgctccggcgtgactttgtttgcaccttcgaaggatgcggtgcatcattc
gggtataagcatcttctacagaggcattcagctcggatccactcgatccacggagattct
catggaaatcttcattctgtagtactcgatgaagttcccgcagaaggatgcacacccttg
aagacactggaaaacagtgtgattgacgtactgacgggtaaagcatacgaagatcatgcg
aagcggcgtctctctgctacggagacgcttgcttgcccatatccggtcataccaggacac
aaattagagacatctagtggattgtcttcagcgccatgcaaattcgtcttcagtcgcgca
tatgatcttcgccgtcatctagcatccgcacacgcgctcaatattgaccgagaacaggct
acagaagtggtgaaagctttgcgtcgggctgcaaaagcacctagaagttgtatagacgga
ctagatttgtacgtttggtcattgatatattggtag
DBGET
integrated database retrieval system