KEGG   Fomitiporia mediterranea: FOMMEDRAFT_73659
Entry
FOMMEDRAFT_73659  CDS       T03132                                 
Name
(RefSeq) WD-repeat protein
  KO
K14855  ribosome assembly protein 4
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fme03009]
    FOMMEDRAFT_73659
Ribosome biogenesis [BR:fme03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    FOMMEDRAFT_73659
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta EIF3I WDR55 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd DSE1_N ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin CFAP251_N Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ASA1 Beta-prop_WDR19_1st NBCH_WD40 NLE Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_Nup120_160 PAC11 Beta-prop_pof12 TRM82_WD WDR54 Nucleoporin_N Tricorn_N Beta-prop_NUP159_NUP214 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 18679609
NCBI-ProteinID: XP_007261532
JGI: Fomme1_73659
LinkDB
Position
Unknown
AA seq 520 aa
MATLLPPPKRPKLYHGVPEPDKPPEEPVPNVVVQFVSEDDGKSIAPAVQLPANVSREDLE
LLVNKLSTKDSDEPTPFSFYISLPPPKGGPSSTPTRVTITKSILSDVLSNDSYNLTAEDK
LTIICAPQAVFRVRPATRCSSSLSGHSAPILCAAFSPTGARLATGSGDCTARLWDLDTET
PGPALVGHKGWVLCVAWEGMERRLATGGHDGHIRLWDAKTGAPQGDALKGHTKWVMSLAW
EPIHLNASSPRLASASKDGTVRVWLPASRKLEYTLGGHTASVNCVLWGGGGIGGKGVLYT
ASSDQTVKVWDPNGGKLLHTLKEHAHWVNTLALNTDFVLRTGPFDHTSKKPASDEEAQSL
ASKRYTSLLSTTPELLISGSDDHTLFLWSLFPSQAAKKGGKLKPLTRLVGHQKQVSHVSF
SPDGRWAASASWDSSVRVWEGRTGKFVATLRGHVGAVYRLAWSADSRLLVSASKDSTLKI
WDLKTYKLKTDLPGHTDEVYCVDFVADKLVSGGRDRQVKM
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcgacactcctcccgcccccaaaacgtcctaaactataccacggtgttccagagcct
gacaaaccacccgaagagcctgttccgaacgtcgtcgttcagttcgtttcagaagacgat
ggaaagagtatcgcacctgctgttcagcttcctgctaatgtgagcagggaggatctggag
ctgctcgtcaataagctgtctacaaaggacagcgatgagccaacaccattctcattctac
atctctctccctcctccaaaaggcggcccctcaagcaccccaacgcgcgtaacgatcacc
aaatccatcttatccgacgtcctctccaacgactcatacaacctcacagcagaagacaag
ctcacaatcatatgcgcccctcaagccgtcttccgcgtccgccccgcaacgcgttgttcc
tcctctctctcaggacacagcgcacccatcctctgcgccgcgttctcacccaccggtgcg
aggcttgcaactggttcgggggactgtacggcaagattatgggatttggacacggagacg
ccgggtcctgcgcttgtagggcataaaggatgggttttgtgcgttgcgtgggagggtatg
gagagaagacttgctacgggtggacatgatggacatatacgactttgggatgcgaagact
ggtgctccgcaaggggacgcgctgaaaggacatacgaagtgggtgatgagcctcgcttgg
gagcctatacacctcaacgctagctcgccccgacttgcgagtgcctcgaaagatgggacg
gtacgtgtttggttacccgcttcgaggaagttggagtatacgctcggtggacatacggcg
agtgttaattgcgtgttgtggggtggaggtgggattggtgggaagggggtgttgtatact
gcctcgagtgaccagacggtgaaagtttgggatccgaacgggggaaagttactacacacc
ctaaaagagcacgcacattgggttaacaccctcgcactcaacaccgatttcgtcttacga
acaggacccttcgatcatacgtccaaaaagcctgcttcagacgaagaagcccaatccctc
gcatcaaaacgctacacctccctcctctccacaactcccgaactcctcatctcaggctca
gacgaccacaccctcttcctctggtctctattcccctctcaagcagcgaagaaaggaggc
aagctcaaacccctcacccggctcgtcggacaccaaaaacaagtgtcgcatgtctcattt
agcccggatgggaggtgggcggcgagtgcgagttgggatagtagtgtacgtgtttgggag
gggaggactgggaagtttgtagcgacgctacgaggacacgtcggagcggtgtaccggctt
gcgtggtctgctgattcacggctgctcgtgagcgctagcaaggatagtacgctcaagatc
tgggacctcaagacgtataagctcaagactgaccttcctggacataccgacgaggtgtac
tgtgttgacttcgttgctgataaactggttagtggtggacgagatcggcaggtcaagatg
taa

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