Fomitiporia mediterranea: FOMMEDRAFT_76909
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Entry
FOMMEDRAFT_76909 CDS
T03132
Name
(RefSeq) transcription initiation factor IIF, beta subunit
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOMMEDRAFT_76909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_76909
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
FOMMEDRAFT_76909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
18679770
NCBI-ProteinID:
XP_007263412
JGI:
Fomme1_76909
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MDDSVQTETKPDIDVKDEEETQPDPDEIMDMTNGNGRAWCVKVPKYLMEKWSSISEDNVH
LATLRAYGPDPRTGKSRFALFVPINPPDPSDPKAKEAPSLEPGTYEEYDLDMVNESVENQ
IVVAESTPTQGSRVRSTILTGRVKHECSLRPKLTDAYRRRVRMRTITANTPKRSAKIMDE
AEAGGVGRMNRLGSGMATPSSAFSNLVKPKPKPAKGTYERFARIPRNQLLDMLFALYRER
PRWSAKDLRSRTEQPEAYLKEVLNGIADLHRSGEFNGMYELKPNFRDSVSRTVKTESGEY
SGAAGELMKTEPDVEMIDDDEDEDDDDEDMEEIS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatgactctgtgcagactgagacgaagccagacattgacgtgaaagatgaggaagag
acccaaccagacccagacgagatcatggatatgacgaacgggaacgggcgggcatggtgt
gtaaaggtgccaaagtatctgatggaaaaatggagctccatctcggaagataatgttcac
cttgcaacattgcgagcttatggtcccgatccacgcacgggaaaatcacgcttcgcactg
ttcgtgccaatcaacccgcctgatccctcagatccaaaagcaaaggaggcaccttctctt
gaacctggaacgtatgaagaatatgacctagacatggtcaacgaatccgttgagaaccag
attgtcgttgctgagtcaacacctactcaaggctcgcgtgtgcgttctacgattctgact
ggtcgtgtgaagcacgaatgtagtttgcgaccaaagttgacggatgcatatcggcgacga
gttcgaatgaggacaattactgcaaatactccgaaacggagtgcgaagattatggatgag
gctgaggcgggtggagttggacgaatgaacagacttggaagcggaatggcaacgccatct
tcggcgttctctaacctggttaagccgaaaccaaagcctgcgaaaggcacctacgagcgg
tttgctcgtattcctcgcaaccagctgttggacatgctgttcgcgttgtatcgcgaacgg
ccacgatggtcagcaaaggatctgagaagtcgcactgagcagcccgaagcatatctgaag
gaggtattgaatgggattgctgacctccatcggagtggtgagttcaacgggatgtatgag
ctcaagccgaacttccgagattcggtaagtcggactgtaaagactgagagcggagaatac
tcgggtgcggcgggtgaactgatgaagactgagcctgatgttgaaatgatcgatgatgac
gaggacgaggatgatgacgatgaagatatggaagaaatctcatag
DBGET
integrated database retrieval system
