Fomitiporia mediterranea: FOMMEDRAFT_77409
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Entry
FOMMEDRAFT_77409 CDS
T03132
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOMMEDRAFT_77409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_77409
Enzymes [BR:
fme01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FOMMEDRAFT_77409
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOMMEDRAFT_77409
Prokaryotic type
FOMMEDRAFT_77409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
18679803
NCBI-ProteinID:
XP_007263025
JGI:
Fomme1_77409
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MAGVTSGEPTVKKQKLDRTVASLNAKEESIGSTTARFATSDLQPLNSIPFSMQAFMDSLT
EEQRSLLSLECETMGKSWLKVLKDEIKKPYFIALKKFLWSEGVKGPTDVTKNIFPLPTNI
YTWSKTPLGRVRVVIIGQDPYHTPGMAHGLCFSVPHGQSLPPSLLNIYKEIRNEYPEFTP
PKHGNLTAWANSGVLLLNSALTVRSGAANSHKGKGWEAFTEKVIETVDKYGGANLSGANG
VGRGIVFLCWGKDAAKRVAKLDKEKHCILHSAHPSPLSASRGFFRNGHFKKANDWLESRY
GKDGLIDWCTLDVQEPNPSQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtcacatcgggggaaccaacagtgaagaagcaaaagctcgatcggacagtt
gcttccttaaatgctaaagaagagtctatcggctccactacggcacgatttgcgaccagt
gatttgcagcccctcaattctatccccttttccatgcaggccttcatggactccttgaca
gaggagcagaggagcctactgagtctagaatgcgaaacgatggggaagagttggctcaaa
gttcttaaagatgaaataaagaagccttactttatcgcattaaagaaattcctgtggtcc
gagggcgtcaaaggccctactgacgtgacaaaaaatatcttcccactaccaaccaatatc
tatacctggtcgaagacccctcttggccgtgtcagggttgtcatcatcggacaggacccc
taccacactccaggcatggcgcatggattgtgcttctctgttccccacggacagagtctt
cctccttcgctattgaacatctacaaggagatcaggaatgaatatccagaattcactccg
ccgaagcacggtaacctaaccgcctgggctaactccggtgttctgctattgaactcggca
ttgacggtgcgcagcggtgccgcgaactctcacaaggggaagggctgggaggccttcaca
gaaaaggtgatcgaaaccgttgacaaatacggcggagcaaatctcagcggagcaaacggg
gttggtcgcggcatagtcttcttatgctggggaaaagacgccgcaaagcgcgtcgcgaag
ctcgacaaggagaagcactgtattcttcatagtgctcacccctcccctttaagtgcttca
cgcggcttctttaggaacgggcacttcaagaaggccaatgactggcttgaatcgcgatac
gggaaggacggccttatcgactggtgcacactggatgtacaggaaccaaacccatctcag
taa
DBGET
integrated database retrieval system
