Fomitiporia mediterranea: FOMMEDRAFT_78078
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Entry
FOMMEDRAFT_78078 CDS
T03132
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_78078
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
FOMMEDRAFT_78078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
SbcC_Walker_B
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
18679849
NCBI-ProteinID:
XP_007264195
JGI:
Fomme1_78078
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MGKRRTSGVESDEDDAEFVTSSKRARVEDDDDDHVREEESDEQKAFEARYGELVRASIEA
KQHYQGRIADCGIIQSLEMQQFMCHPRLSFTFGPQINFIIGHNGSGKSAVLSALTIALGG
KAITTGRGSGLKSFIQEGKTWSEVTITLKNEGEDAYRPDVYGKSITIIRNFTKAGSTGYK
IKSRDGKTVSTKREELAKICDHMNIQVDNPMNVLTQDSARQFLSTSHPTDKYEFFLKATQ
LKQLSEEYESCLENIGKTYKILEAKKEVLPELKATAIEAQNRYKGAQLALQTRGRVTELK
QEQAWAFVQDKEEEMKAKIDEVARRSRKLPKLKDKVDATKKLHDEHSEKIADLETEIKDL
GDINHLNLQQAEIKGKLKANKTKLREYQASEKEMSIELKTAKNTIEDLQERIATETRKLQ
EDKKAEQEERQRKLEAAKKAVSEHEARRNEINDHLRQFEEDMGPLKTKVADTETTLQNSK
ATMESCSRRLNELNRQAVDSVSVYGNNLQQILERISTMTWHGKKPVGPLGLYVSLRERQW
TDIIRATLGSYMTSFAVTDARDRVQLRKLLVDSKNGHMQVFVASDDLFEYESGEPPRDKV
TILRVLEVTGEYVKRILINNSRIERTFLAPTRVEAERLAEEANGGTAISADFYRVTAYPE
GGSYSQPIQELRNEDPRMRKLIFDCRHWKEKGRQADEAYQQANTEMQKYRQELDELNRQR
AIRSVPKGIENRLFKLKQDLRTLQNEHNDDIPVNISSLEEAMKEAEETKENIVNQFKDLV
TAKGEVDNEQKQLLTELKKITAQVDEFESKRSDLEVRLVDASGKRSRAQAEMRTCEEKLR
VEQRAIAELELAAKNLQLEFENWTRHAEEFCDGKRVENPRKSTEVERELKSVQAALKQQE
KENGATLEELEEALQEAKQKYQNTEQDLKNLSKLNRALKESIVRRLQRWHDFRRHIALRT
KLQFQHHLAMRAYFGKVLFDHDKQKLELKVQTDDQAATQGLNKDPKSLSGGEKSFATICL
LLALWEAIGCPIRCLDEFDVFMDAVNRRISMKMMIDTANASDSKQYILITPQDMSTVAFG
PTVRVHRMGDPERGQTTL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgcaggacctccggagtagaaagcgacgaagacgatgctgaatttgtaacg
tcttccaaacgcgcccgcgtcgaagacgacgatgacgaccacgtccgagaggaggagagt
gacgagcagaaggccttcgaggccaggtatggcgagctggtcagagcttcaatcgaagcg
aagcaacactaccaaggaaggattgccgactgtggcattattcaatcattagaaatgcaa
caatttatgtgccacccgcgcttatcgttcacttttggcccgcagataaacttcattatt
ggacacaatggaagcggaaagagtgcagtcctatccgctttgacaatcgcactgggcggt
aaggccatcactacaggcaggggtagcggccttaagtcgttcatccaggaaggtaaaaca
tggtcagaggtaacgataaccctaaagaatgaaggagaagacgcatacaggccggacgtc
tatggcaaatcaatcactatcattcgaaacttcaccaaggcaggttccaccggatacaag
atcaaaagtagagatgggaagaccgtcagtactaagagagaagagttggcaaagatctgc
gatcatatgaacatccaagtcgacaatcccatgaatgtactgacgcaggattcggcacga
cagtttctcagcacttctcaccctactgataaatacgaatttttcctcaaggccacgcaa
ctcaaacaactgagcgaagagtatgagtcttgtctcgagaacattgggaaaacatacaag
attttggaagcgaagaaagaggtcttgcccgagctgaaggctactgctatcgaagcgcaa
aatcgttataagggagcacagctagctttgcagacaagaggaagagtgaccgagctgaag
caagagcaggcatgggcgtttgtccaagataaagaagaagaaatgaaggcaaagatcgac
gaagtcgctaggagatcgcgaaagctgcctaagctcaaggataaagttgatgcaaccaaa
aaactacacgatgagcatagcgagaagattgcggacctcgagactgagataaaagatctt
ggtgatattaatcatctaaaccttcagcaagccgagatcaaaggcaaactgaaggccaac
aagacgaagcttcgggagtatcaggctagcgagaaggagatgagcatcgagctaaagacg
gccaaaaatacgatcgaagaccttcaagagaggatcgctaccgaaacaaggaagctgcaa
gaggacaagaaagccgaacaagaggaacggcagcgtaagctggaggcggccaagaaggct
gtcagtgagcacgaggcccgccggaacgagatcaacgatcaccttcgtcaattcgaggag
gatatggggccattaaagactaaagttgccgataccgaaactactttgcagaatagcaaa
gcaacaatggaatcctgttctcgccggttgaacgagcttaaccgacaagcagtcgacagt
gtcagtgtttacggaaacaatttgcaacagattctggagcgaatcagtacaatgacatgg
cacggcaagaaacctgtgggccctctggggttatatgtttcattgcgtgagcggcagtgg
acagacattattcgtgcaactctgggatcgtacatgacgtcttttgctgtcactgatgcc
cgtgatcgagtacagctgagaaagttactagtggattcaaaaaatggccatatgcaagta
ttcgtcgcatcggatgatctatttgaatacgaaagcggtgagcctccaagggataaggtc
actatattgcgagtgcttgaggtgactggtgaatacgtgaaacgcatactaatcaacaat
agtcggattgaacgcactttccttgctcccactcgcgtggaggctgagcgtcttgcggaa
gaggcgaatggtggtacagccatatcggctgacttttacagggtgacggcctatcccgag
ggcggctcatactcgcaaccaattcaggagctcaggaatgaagatcccagaatgcggaaa
ttaatctttgattgcagacattggaaggaaaaaggaagacaggcggacgaagcatatcag
caggcgaacaccgagatgcagaagtacaggcaggaactagacgagctgaatagacaacgt
gccattcgcagtgtaccaaagggtatcgaaaacaggcttttcaaactgaagcaagacctg
cgtaccttgcagaatgagcacaacgatgatattccggtcaacatttcttccttagaagag
gccatgaaggaagcggaggagaccaaagagaatatcgtgaaccagtttaaggatctcgtc
acagctaagggcgaggtggataacgagcaaaagcaactgctgacagagttgaaaaagata
acggctcaggtggacgaatttgagagcaaaagaagtgatttggaggtacgtcttgtggat
gcttccggaaaacgcagtcgagcgcaagcagagatgaggacttgcgaagagaaacttaga
gtggaacaaagggcgatcgctgagctggagctagccgcgaagaacctgcagttggaattc
gagaattggacgagacacgctgaagagttctgcgatggcaagagggtcgaaaatcctcgt
aaatcgactgaagttgagcgtgagctgaagtctgtccaggcggcgctcaagcaacaagag
aaagagaatggagcaactcttgaagaactagaagaagcgcttcaagaagccaagcagaaa
tatcaaaacacggagcaagatctcaagaacctatcgaaactcaatagggctctaaaagag
tctatagtcagacggctgcagcgctggcacgacttccgacgacacatcgcactccgcacc
aagttacaattccagcaccatcttgccatgcgagcttactttgggaaagtgctattcgac
catgacaagcagaagttggagctgaaggtgcagacggacgaccaggctgcaacgcaaggg
ttgaataaggatccgaagtcgttgagtgggggcgagaagtcgtttgcgacgatttgtttg
ttgcttgcgctttgggaagctattgggtgtccgattcgttgtttggatgaattcgatgtc
ttcatggatgctgtcaataggcgtatatccatgaaaatgatgatcgacactgccaacgcg
tcagacagcaaacaatacatcctcatcacgcctcaggatatgagtactgtcgcttttggt
ccgactgtgcgtgtacatcggatgggcgatccggagcgtgggcagacaacgctttga
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