Fomitiporia mediterranea: FOMMEDRAFT_78311
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Entry
FOMMEDRAFT_78311 CDS
T03132
Name
(RefSeq) NOL1/NOP2/sun family RNA met
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_78311
Enzymes [BR:
fme01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
FOMMEDRAFT_78311
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FOMMEDRAFT_78311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
PCMT
FtsJ
DUF938
Motif
Other DBs
NCBI-GeneID:
18679860
NCBI-ProteinID:
XP_007263976
JGI:
Fomme1_78311
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MRHCARVLSNFKRLAAKDRSRSEYVEQLLADIASYYGYNDFLTEKLFHLFPVLEAIEFFE
SNELPRPVTIRTNTLRTRRKDLAQALIARGVSLEPLGKWSPVGLQVFESSVPLGATPEYL
AGHYMLQAASSFLPVMALDPQPNERILDMASAPGGKSSYISALMQNTGVVFANDANKSRT
KSLTANIHRLGCKNVVVCNYDGREFPKVIGGFERVLLDAPCSGTGVISKDASVKVNKSAR
DFALLSHLQKQLILCAIDSVTASSSSSPGIVVYSTCSVTVDENEAVVDYALRKRPHVQLL
ETGLAFGRDGFTRYRGKVFDPSVKLTRRFYPHVHNMDGFFVAKLKVGRPQKGAQKRTTET
ESGKKNVEPVEAASDAMDVDGVAFDEDEDRPYLEANKRRQMKAKGLRVPPRTVQASKPAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcattgcgctcgcgtgctctcaaattttaagcgacttgccgcgaaggatcggtca
cgctcggaatatgtcgagcagttattggcagacattgcgagctactatgggtacaacgac
tttctcaccgaaaaattattccatcttttcccagtgctggaggcgattgagttctttgag
tcgaacgagcttccgcgaccagtcactattcgtaccaacacccttcgaacgcgacgcaag
gaccttgcacaggcgctcatcgctcgcggtgtctctctcgaaccacttggaaaatggtct
ccggtcgggttacaagtcttcgaatcgtcagttcccctcggcgcgacaccggaatacctt
gctggacattacatgctccaagctgcatcatctttcttgccagtaatggctctcgacccg
caaccaaatgaacgtattttggacatggcgtctgctcctggtgggaagtcttcatatatc
tccgccctgatgcagaacacaggtgtggtctttgcgaacgacgcgaataagtcgcgtaca
aagagtttgacggcgaatattcatcgtttggggtgcaagaacgtcgtcgtatgtaattat
gacggaagagagttcccgaaagttatcggaggctttgaacgagttctgcttgacgcaccg
tgcagtggaaccggtgtcataagcaaggacgctagtgtcaaagtcaataagagtgcacgc
gactttgcactcctttcacatctacaaaagcaactcatcctttgcgcaattgacagcgta
accgcttcctcatcctcctcacctgggattgtcgtctactcaacatgctctgtcacagtc
gacgagaacgaggctgtagtcgactacgccctccgcaagcggccgcacgtacagttacta
gaaactggactagcattcggccgcgacggcttcacacgttaccgcggaaaagtgttcgat
ccaagcgtaaagctcactcgtcgtttctatccacacgtgcacaacatggacggcttcttt
gttgcaaagctcaaagttggtcgtccacaaaagggtgcgcagaagcgcacaacggaaacc
gaaagcggaaagaagaacgtggagccagtagaagctgcttcagacgcgatggatgtagat
ggcgtggcattcgatgaggatgaagatagaccgtatcttgaggcaaataaacgacgacag
atgaaggcgaaaggactgcgtgttcctccacgaaccgtgcaagcaagcaagcccgctagc
tag
DBGET
integrated database retrieval system
