Fomitiporia mediterranea: FOMMEDRAFT_78324
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Entry
FOMMEDRAFT_78324 CDS
T03132
Name
(RefSeq) Dna2-domain-containing protein
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOMMEDRAFT_78324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fme03032
]
FOMMEDRAFT_78324
Enzymes [BR:
fme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FOMMEDRAFT_78324
DNA replication proteins [BR:
fme03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
FOMMEDRAFT_78324
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
FOMMEDRAFT_78324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_19
AAA_30
Dna2_Rift
UvrD-helicase
SRP54
nSTAND3
AAA_16
CbiA
bpMoxR
Helicase_RecD
DUF87
AAA_7
Fer4_NifH
ResIII
MeaB
AAA_5
ATPase
MobB
Motif
Other DBs
NCBI-GeneID:
18679861
NCBI-ProteinID:
XP_007263828
JGI:
Fomme1_78324
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MPSSRHSAQDEAVFMQELLSGVDSSFFDAVPSPDPTPKKRKRPTEELSENKHLSGQKENA
NVVFESAKKKPRALGSQDYDIAALLEGAEDWDWDDMLSPVRKKPAVRMAIPSTPDPSASV
FRCTVESIEHDRLTKKLLVVSEKESKCRTVTLKDDWIQTDVSTGDTIHVIGVFTPRDEDI
TISAKRNLLIQHPDVLMTSTSIAGAPHCARRSLLSLLMRSSSGKTRSLVWGNILHEVMQR
CLSSQRWDAPSIEAFIDETIQKGLTELVHIDVGVEEARIEINKRAGGLKAFGERFLGEVP
KANAYLSNTRDGQGKVSRLAITHLHDVEEEIWAPKYGLKGKLDATVQVRIDEETKGLNLK
HGQLPLPSQTITTTMPLEIKTGRAIAGMEHRAQTMLYTLLMAERYGTPLPSPISGSSCHG
SPPGGLLFYTQSEEVIRVPPGWNELRGLIMARNELANYLMRRSRRRKKSFEEANSKESMH
EEKPAEVPFLPPTIDQERACGRCYVADACMLYRKAVEGVKDNYSPIAALYELKTGHLSEN
QLMFFKQWENLISLEEQDMTRFRKEIWTLGATEREKSGRCLADMVLDPTFDATSAQDNAR
IHRYTYRFTRRPRSPSVLKDASSSSSPSLLHGHVTSGEPVVISVLGDPRLVALARGYVLD
LNPESIVVGCDHSLSPGSLKSWSSFPLAQEDIAFRIDKDDLLGGMGRVRDNLAQLFYVSS
PRRLLEQIVDLKPPEFDAECHIPMDAALDGLNACQQHALEHCLRARDYALILGMPGTGKT
TTVAHMIKVLVEMGKTVLLTSYTHSAVDTILLKLKETAKFGILRLGNKDKVHPNVQEFTL
NAGERATTVEQLEHQLLRPPVVAATALSTDHKEARKGGFDVSLFRRLSSAHPTAVVDLTY
QYRMNANIMLLSNKLIYSDRLKCGSAEIADQSLVIPNAVEHGRSCSTNDSSCWIQTIIDE
SCKAIFVDTDALPALDSRVGDLVQNEVEASLVQQLTLALLNGGVREEQIGIISLYRQQIK
LLSRLLLDNKGIEILTADRSQGRDKDCIIISLVRANEENQIGDLLKDWRRINVAFTRARA
KLVIFGSRKTLKASPLLSDFFGLMEERGWVLTLPTGADTLHSYATASIEANEQDSSKYGP
PKSSIAGGRNVAHPKKTKQVTLENSLLRARPVLRDILNGTK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttcaagacattctgcacaagatgaggccgttttcatgcaagaacttctgtct
ggcgtagattcttcgttcttcgacgcagttccttcaccagatccaactccaaagaagcgc
aagagacctacggaggagctgtctgagaataagcacttgtcaggacagaaagaaaatgcc
aatgtagtctttgagtctgcaaagaagaaaccacgggcccttggctctcaggattacgac
attgcagctctccttgaaggagctgaagactgggattgggatgatatgctttcgcctgtt
cgcaagaagcctgccgtacgtatggccattcccagcacaccagatcccagtgcaagtgtc
tttcggtgcactgtcgagtcgattgagcatgatagactgacgaagaaactccttgttgtc
tcagaaaaggaatcgaagtgcagaacagttacactaaaagatgattggatccagacagac
gtttccacgggtgataccatacacgttatcggagtatttacccctcgcgatgaagatatc
actatttctgcgaaacgtaatttgctcatacagcaccctgatgtactcatgacgtcgact
tcaatcgctggcgctccgcactgtgcacgtcgttcgcttctatctcttcttatgcgctcg
tcgtcgggaaagacacgctcactcgtttggggtaatattcttcacgaggttatgcagcgt
tgtctctcatcgcagcgatgggacgcgccaagtatcgaggcattcatagacgagaccatc
caaaagggcttgacggaacttgtacatattgacgttggagttgaagaagcaaggatagaa
attaacaagcgtgccggcggcttgaaagcgtttggagaaaggttcttaggcgaagtgccc
aaggcaaacgcgtatctgtcaaacactcgtgatggacaaggcaaggtgtcacgactcgca
atcacccatcttcatgacgttgaggaagagatttgggcgccgaaatacgggctcaaaggc
aagctagacgccactgttcaagttcgcatcgacgaagaaaccaaaggtctcaatttgaag
cacggtcaactgccactgccgtctcagacgatcacaactacaatgcccctagaaataaaa
actggtcgtgccatcgcaggcatggagcatcgggcacaaacgatgctgtacacgctgctt
atggcggagcgatatggtactccgcttccgagccctatttccgggtcttcatgccatggt
tcccctcccggaggtttgctattctatacacagtcagaagaggtcattagagtaccacca
ggatggaatgagctgcgtggcttaataatggcaaggaatgaattggcgaattatttgatg
agaaggtcgagacgaaggaagaaatcatttgaagaagccaattcaaaggaatctatgcac
gaagaaaaacctgctgaggtgccgttcttgcctccaactatcgatcaagagcgagcatgt
ggtaggtgttatgtcgcggatgcttgcatgctgtacagaaaggcggtcgagggagtcaaa
gacaactactctccaattgctgccttatacgaattaaagactgggcacttatcggaaaac
cagctcatgttcttcaagcagtgggagaatttgatctctcttgaggaacaggacatgacc
cgattccgtaaagaaatctggactctaggtgccactgagcgagaaaagtcgggtagatgt
ctcgctgacatggtccttgacccaacctttgatgcgacaagtgcacaagacaatgctcga
attcatcggtacacgtatcgatttactaggcgaccgcgatcgccctccgtacttaaggat
gcatcttcatcaagttctcctagtctgttgcacggtcatgtcacttcaggcgagccggtg
gtcatttcagtgttaggcgatcctcgattagttgcattggctcgtggatacgtgctagac
ctcaaccctgaaagcatcgttgttggatgcgaccacagtctttctcctgggtccttaaag
tcctggagttccttcccacttgcacaggaagatatcgccttccgcattgataaagacgac
ttgttgggtggcatgggtcgtgtacgagacaatctcgctcagcttttctacgtgtcaagt
cctcgccgcctcttagaacagatcgttgatctgaagccgccggagtttgatgccgagtgc
catatacctatggatgcggccttagacggtctaaatgcctgccagcagcatgcgctggaa
cactgtcttcgagcgcgtgactacgccttaattctaggaatgccgggcacaggcaaaaca
acaaccgttgcacacatgattaaagtactagtggagatgggcaaaacggttctgctgaca
tcatacactcactcggctgtggacacgattttgctcaagctaaaggagacggcgaagttt
ggtattttgaggcttggtaataaagacaaggtacatccaaatgtccaggaattcacgctc
aatgcaggagagcgtgcaacgacagtggaacaattagaacaccagctcctgcgaccaccc
gttgtagctgcaacagccctatccacagaccataaagaagcgaggaaagggggcttcgac
gtatctctattccgaaggctttccagtgcgcatccaaccgctgtggtggatctgacgtac
caataccgcatgaatgcgaatatcatgcttctgtcgaataaattgatatattctgatcgt
ctgaagtgtggctctgctgaaatagccgaccaatccctcgtcattcctaatgcagtagaa
catggccgctcatgtagcacaaatgattcgtcatgctggattcagacaataattgatgaa
agctgcaaggcgatttttgtcgacacggatgcattaccagcacttgattcacgggtcggc
gatctcgtccagaacgaggtggaagcatcgcttgtccagcaactgacccttgcactccta
aacggtggtgtgcgtgaggagcaaattggcatcatttcactatatcgacaacagataaag
cttctatcgcgtctgctgctggataataagggcattgagatcttgactgccgacagaagt
caagggagggataaggactgtataatcatctctctcgttcgtgcaaatgaagagaatcag
attggtgacctgcttaaagactggaggcgaatcaatgtcgcttttacacgagcacgcgcc
aagcttgtcatcttcgggagcaggaagacgttaaaagcatcgccgcttctttcagatttc
ttcggactaatggaagaacgaggttgggtgctgacattacccacgggagccgatactttg
cattcatacgcaacagcaagcatcgaagcaaatgaacaggattcgtcgaaatatggtcca
ccgaagtcgagcatcgctggaggacgaaatgtcgcccatccaaagaaaacaaagcaagta
acattggagaacagtttacttcgcgcacgaccagtactgcgcgacattctaaacggcaca
aaataa
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integrated database retrieval system
