Fomitiporia mediterranea: FOMMEDRAFT_78644
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Entry
FOMMEDRAFT_78644 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_78644
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_78644
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
FOMMEDRAFT_78644
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
FOMMEDRAFT_78644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
18679876
NCBI-ProteinID:
XP_007264148
JGI:
Fomme1_78644
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MIASPLVARPVPVPAPEPPPPTLTDRTSAALDVIPKLEKPESPWPIKQPFDSFLVLDVEA
TCQEGTDFNWPNEIIEWPVVLLRWRNKDKEGRAKELYVADEFRSFVRPIWKPQLSAFCTT
LTGITQTQVDRAPKFPKVLESFREFLVRNELIDDATEAKRERFVWCTDGPFDIRDFVVKQ
CFISKIQMPTWLKGEVLDVRRVVTHCLNLQANSGGRDARAPRRRTLNIEEQLRTLNLAEF
IGRQHCGIDDTRNIARILTELAKRSIRLEPNTTIYPGRRWQWMGKPGQILEEYCFI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcctctcccctagttgcgcgtcctgtaccagtacccgcaccagagccaccccct
ccaaccttaaccgaccgaacatcggcggcgctcgatgtcatccccaaattagagaaaccc
gaatcaccttggcctatcaaacaaccctttgactcgtttttggttctggatgtcgaagct
acttgtcaggaaggaacggattttaactggccgaacgagattatcgaatggcctgtagtc
ttgttacgttggcgaaataaagataaggaaggaagggcgaaggagttatatgttgcggac
gaattccgtagtttcgtacgaccaatctggaagccacaactatccgcattttgtaccacc
ttgaccggcataactcaaacacaagtagaccgagccccaaagtttcccaaagtcctagaa
tcttttagagagtttcttgtaaggaatgagttgattgatgatgcgacggaggcgaagcgg
gagcggtttgtttggtgcacggacggtccgttcgacattcgggatttcgtggtaaagcag
tgctttatctcaaagattcagatgcctacttggctaaagggcgaggttctggacgtgagg
agggtcgtgacgcattgtttgaacttacaagctaacagtggtggtcgtgatgctcgcgct
ccaaggcgtcggacgctgaacatcgaggaacagctgcgtacacttaaccttgctgagttt
attggacgccaacattgtggcatcgacgatacgaggaacatcgcgcgtattctgaccgag
ctcgcgaagcggtcgatccgtctagagccgaacacaacgatttaccccggtcgccgatgg
caatggatgggcaagccaggccaaatccttgaggagtattgttttatctag
DBGET
integrated database retrieval system
