Fomitiporia mediterranea: FOMMEDRAFT_78766
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Entry
FOMMEDRAFT_78766 CDS
T03132
Name
(RefSeq) DBR1-domain-containing protein
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_78766
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_78766
Spliceosome [BR:
fme03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
FOMMEDRAFT_78766
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
RNase
FOMMEDRAFT_78766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Motif
Other DBs
NCBI-GeneID:
18679884
NCBI-ProteinID:
XP_007264289
JGI:
Fomme1_78766
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
IAIEGCCHGQLDSIYEHISQLEKQNNYKVDCLLICGDFQAMRNHQDLQCMAVPDKYKRIG
GFYRYYTGEKTAPILTLVIGGNHEASNYMWELYHGGWLAPNIYFLGFAGCVQVNGIRIAG
LSGIYAEHHYKLGHFEAIPYNNGALRSIYHVREYDIFRLSQLSSADIVLSHDWPQGIAKH
GDADDLLRRKPFFRSDIESNVLGSPPAMQLLRRLKPSWWFSAHLHCRFEATVVHEELSYQ
TRTQGSWCSIPGDGNNPDEIVIDDLDDDLDPESAEAKPVEITVPSEAGRAEELPINPDEI
LLDDELEGVAAPPPVRDTTKFLALDKCLPRRQFLEVVDVPCADSPETPRLMFDPEWLAIT
RAFHPYLSIERLQPRLPDTAEAKERVKQELEWVTRNISDRDVHDCQVFWPTAPGPGSEGP
NRNRQPPWFTNLQTEAFCDMLQLENKVNPVPKNMPSRPPAVA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atcgccattgagggatgttgtcatggacagctcgattctatatatgagcatatttctcaa
ctggagaaacaaaataactataaagtcgactgcctgctgatctgtggtgacttccaagcc
atgcgaaatcaccaagacctccaatgcatggccgtaccggataaatacaagcgtataggc
ggattttatagatactacacgggagagaaaacggcgcctatcttgacactcgttatcggt
gggaatcacgaggcgtcgaactacatgtgggagctgtatcacggtggatggttagctcca
aatatatatttcctcggcttcgcaggctgcgtgcaggtcaatggaatcagaatagcgggt
ctgtcgggaatctatgcggaacatcattacaaattaggtcacttcgaagccatcccttac
aataatggcgcgcttcggagtatatatcatgttcgcgaatatgatatattccgtctttct
cagctatcatccgctgatatagtattatcccatgactggccacagggaattgcgaaacat
ggggacgcggatgatctacttcgccgcaagcccttcttccgatcagatattgagtcgaat
gtacttgggtcgcctccagccatgcagcttcttcggagattaaaaccaagttggtggttt
tccgcacacctgcattgcaggtttgaggcgactgtcgttcatgaagagctatcttatcaa
actagaacgcaaggttcgtggtgttctataccgggagatggaaacaatccagacgagatt
gtaatagatgatcttgatgatgaccttgacccggagtcggccgaagcgaaacccgtggag
atcactgtcccatcggaagcgggtcgggcagaagaactgcctatcaatcccgacgagatc
ttactcgatgatgagctggagggtgttgccgcgccgccaccagtacgggacacgacaaag
tttcttgcattggacaaatgcctcccgcggcgacagtttttggaggttgtggacgttccc
tgcgctgattctccggagactcctcgactcatgttcgatccagaatggttagcaatcacc
cgagctttccatccttatctatcgattgagcgcctccaacctcgactgccggacacagca
gaagcaaaagaaagggtaaaacaagagttagaatgggtaactaggaacatcagcgataga
gatgtacacgattgccaggtcttctggccaacagcacctgggccgggaagcgagggaccc
aacaggaatagacaacctccctggtttacgaatctacagaccgaggctttctgcgacatg
ctgcagctcgagaacaaggtgaatcctgtgccaaagaatatgccctccagaccgcctgca
gtcgcgtaa
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