Fomitiporia mediterranea: FOMMEDRAFT_79074
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Entry
FOMMEDRAFT_79074 CDS
T03132
Name
(RefSeq) ubiquitin-protein ligase E3
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_79074
Enzymes [BR:
fme01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
FOMMEDRAFT_79074
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
FOMMEDRAFT_79074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Rtf2
zf-RING_5
zf-C2H2
SesA
zf-RING_2
zf-Nse
zf-C2H2_ZN142
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
18679905
NCBI-ProteinID:
XP_007264175
JGI:
Fomme1_79074
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDIPLKELDKLQKLTTNGKGKSVGVAESLDGLLAALRDVKERVESGTASEQDVANIEKIV
EERRKEIDERQKEVHATLGRIGKALDKKFANPVPELPPLFTSAEAQEALQRTIALHFLRT
GQFDTAEVFLDDSNIDIAPGTTDQFRELHEVLTALRNQVIQPALSWCSRNSKFLAERNSP
LEFHLHRSQFMRLLLASNPPNEFAAITYLRKRMAHLWGVYDKELLRLCGCFTYQSLADLQ
MSTYADLASPSLHLDLERMFAKEYCASLGMSRQVPLRVVGDIGGGGALARIEKGRKVMRE
RKSEWSQTDELPVSFIEIPLPPENRYHSIFACPVSKEQATPTNPPMMITCGHVIAKDSLA
KLSKPQGRAKCPYCPQEFQQNTALEVHF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacattcctctcaaagagctcgacaaactccagaagctcacaacgaatgggaaggga
aagagcgtcggtgtagctgagtcactggacggtttattggcggcgttacgcgacgtgaag
gagcgggtcgaatcaggtacagcgagcgagcaggatgtggcgaatattgagaagatagtg
gaagaacggagaaaggaaattgacgaacggcagaaggaggttcatgccacattggggcgt
attgggaaagcattagacaagaaatttgccaatcctgtaccggagttgccgcctctgttc
acttctgcggaagcacaagaggcactgcagcgaactattgctttgcatttccttcggacg
ggtcaatttgataccgctgaggtgttcttggatgactcaaacattgacattgctccggga
actacagatcaattccgagaattgcatgaggttctgacagctcttaggaatcaggttata
cagcctgcattatcatggtgctctcggaactcaaagtttctggcagaacgaaactcgcca
cttgagttccatctacatcgttcccaattcatgcgattactgctcgcatcaaatcctccg
aatgaatttgcggccattacctatctgcgaaaacgtatggcgcacctttggggcgtttat
gataaagagcttcttcgtctatgtggctgtttcacgtatcagtccttagcagacctgcag
atgtcgacttatgcagatcttgcgtcgccgtctctacaccttgatcttgagcgtatgttc
gcgaaggagtactgtgcgagtcttggcatgagtcggcaagtgccgcttcgtgttgttggt
gatattggcggaggaggtgcgttagctcgtatagagaaaggaagaaaggtgatgcgagaa
cgaaagagtgaatggagccagacagatgaacttcccgtgagcttcattgagatacctctt
ccaccggagaatcggtatcattccatatttgcatgtcctgtttccaaagaacaggcaaca
ccaacgaatccaccgatgatgattacatgtggtcatgtcattgccaaggacagtctggca
aagttgtcgaagcctcaagggagagcgaagtgtccttattgtccccaagagttccaacag
aataccgccctggaagtgcacttctga
DBGET
integrated database retrieval system
