Fomitiporia mediterranea: FOMMEDRAFT_79224
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Entry
FOMMEDRAFT_79224 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K20307
trafficking protein particle complex subunit 10
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_79224
Membrane trafficking [BR:
fme04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
FOMMEDRAFT_79224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
DUF7077
DUF7076
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
18679913
NCBI-ProteinID:
XP_007263991
JGI:
Fomme1_79224
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MQAQRVKVTLSGPPQLTSTDLWAQVWSALALQFPLRNLHWKPATRTSIRTIQSLDVSLLA
LESLREEGTSQIPVSILDKLLLNIYVVACDDNDSYRSSVKKQIKEWHTQITQRKCQEWMI
LNISKTDPRQTQTGLLKMRGTVIDRIRADFNLDKKDRCAQLTWTTDIENPAIWAEIVSKV
KDGVIAAFDQAVSQREEEVKRSELQKTMPGWNFCTFFILKESLASSFEGANLPEDALLQY
EELEASFFQVLKDRTLWFGNFVEPSSKDDSLPLLSTTKKPYRDLIIANTITVFDIRVYLL
ARQSIVLGQMGRLTDVTRKVSMFLAAFGGRLRDYKEVLPNFFIESWVYSSALSVVETCDD
WARRNLDSSSSNGYNAGKAELLASARNQLDKLGIQLGFLPNGPPFSDCVVDPESLKPVDL
GTVSAKRSSRQISNPDILGFLSDKSSFYDLYIKLTNRAIDLFVKSGRRKFALKLHGSLAA
LDLFRERLTAALQTFTSLPAHYAPNRWSSLEAYMLFQSVETHVRLRSDHDRQWIHIVAAF
LKAYLEDNSMNLLDGMTDKCAYIRRLIENVAEAAPQVDGELVFHDHPMMSVTPLIESARC
AGDKDGYLFDVTIHNKLPCDVPFDNVTLYLSGRGRETMEFRSGSIVAEPGLQTVSLSCPV
PKSGTYAMDKIDLNLGRLSFQWAFAGKQKRRQSSAPAEAANLPKLVKLPKDPRAVQIDIQ
QSLKVEIAGPSWLSVAISRGRNNLTKADLKLSSPDITINTKEGTLRSKCAEVKFLEGQIS
IANANSDQTIRFEMPHSKADNRDIVNVRAVLEYETSDEPGIVRKLSVEREVPLALDLAVN
VQDFFRGEKLLTKFTISTTTHQHVRISSVDLISSDNDAKKIRISKHNKRPAVLTVKPAQP
ANFVFQLEKLGEVDDPLRLCMVYRLLREEVEALVTRHVEKAMPESDHWEHRIAVQDAIVR
NLERSSSWVEMYEMAGEIHLPGGQLNVDGVPEELLAKVKQDLQKRDDLIADKSKWREFTI
PLDLPRLDILVSTRIELVANPFNKEPLKRQQAPPIYAGQPITAIVSINTSFYWAGPDKKD
IKEYTMRFQLEENMKDWLISGQKRGDFKAKDGDTYTVTITLMALRHGELSLPNVRVVAYP
SDNNQSATPVSLEAYQVQGAERLLVLPRGGRTTFFLNVGREQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcagcgcgtcaaagtcacgctctcaggacccccacaactcacatcaacagat
ctctgggctcaagtttggtcggcactcgctttacaatttccacttcgaaacctacactgg
aaaccagctactcgaacatcaatacggacaattcaatctttggatgtcagtctgcttgct
cttgaatcgctgagagaggagggcacgtcccagataccagttagtatcttggataagctg
ctactaaatatatatgttgtagcttgcgatgataatgattcatacagaagttcggtcaag
aaacaaattaaggagtggcatacgcagatcacgcagcgaaagtgtcaagaatggatgatt
ctaaatatctcgaagacggatcctcgacagacccagaccggcttactcaagatgagggga
acagttatagatcgaatacgagcagacttcaacttagacaagaaagaccgttgtgcccaa
ctgacttggactacggacattgagaatccagcaatttgggcggagatcgtctcgaaagtg
aaggatggcgtcattgcagccttcgaccaagccgtttcccaacgagaggaagaagttaag
cgctcagaattgcaaaagactatgccaggatggaacttctgcacattcttcatcttaaag
gaaagtctcgcaagctcttttgaaggggcgaatcttcccgaggacgcgctactacagtac
gaagaactcgaggcctcgttctttcaggttctgaaggacagaacattatggtttggtaat
tttgtagaaccttcgtcgaaggacgactctttacccctgctatcgaccacgaagaagccg
tacagggatcttatcatagcaaatacaatcaccgtgtttgacattagggtttatctctta
gcccgacagtcaattgtacttggccagatgggaaggttgacagacgtcacaaggaaggtc
tcgatgttcctagccgcctttggcggtcgactgcgagattataaggaagttttaccgaac
ttcttcatcgaatcctgggtctattcatccgcacttagtgttgttgagacatgtgatgac
tgggctcgtagaaatctggattcgagttcttcaaacggttataatgccggcaaggcggaa
ttacttgccagcgcacgtaaccagctcgacaagctaggtattcaattgggctttctccca
aacggaccgcctttttcggattgcgtggtagacccagagagcctcaaacccgtagatcta
ggcacagtctctgcgaagcgctcgtctcggcagatatcgaaccctgatattcttggcttt
ctgagcgacaaatcatcattctatgacttgtatatcaagctgacaaatagagctatcgac
ttattcgtaaaatcaggtcggcgtaagtttgcccttaagctacacggcagtttagcggcc
ctcgacctgtttcgagaacggctcactgcggcactgcagacgtttacttcgttacccgca
cattatgcacccaaccgctggtcgagtctggaagcgtacatgctgttccaaagcgtggaa
actcatgtgcgactacggagcgatcacgaccgacaatggatccatatcgtcgcagcattc
ctgaaggcctacttggaagataactcaatgaatttactggatgggatgacagacaaatgt
gcatatatcaggcgcctcatagaaaacgtcgccgaggcggctcctcaagttgatggtgaa
ctcgtctttcatgatcatccgatgatgagcgtaacgcccctgatcgagagtgcgcgttgt
gcaggcgacaaggatggatatctctttgatgttactatccataacaaattgccgtgtgac
gtaccattcgacaatgttacactgtacttatcgggtcgcggccgtgaaactatggaattt
cgaagtggttctatagtcgcagaacctggtcttcaaacggtgtccctgtcttgtccggtc
ccaaaatctggaacatatgcaatggataagattgatttgaatttgggtcgtctttctttc
cagtgggctttcgcaggaaagcagaaacgtcgtcagtcctcagcacctgctgaagcagcg
aatctgccaaagctcgtcaagcttccaaaggaccctcgtgcagtgcagatagacattcag
caatctctgaaagttgaaattgccggtccatcgtggttgtcagtcgcaatatcacgcggc
agaaacaacttgacaaaagcagatcttaagttatcttctcccgacatcacaatcaatacc
aaagagggcacacttcgaagtaaatgtgcggaagtgaaattcttagaaggtcagatatcc
atcgccaatgcaaatagcgaccagaccattcggttcgaaatgccacactcgaaagcagat
aaccgagatatagtgaatgtgcgagcagtccttgaatacgagacttcagatgagccaggc
attgtgaggaaactgagtgtcgagcgagaggttccattggcacttgacctcgcagtgaac
gtgcaggactttttccggggagaaaaattattgacaaagttcaccatttcgaccacaaca
caccaacacgtccgaatatcttctgtagacctcatatcaagcgacaacgacgccaagaag
ataaggatcagcaagcacaataagcggccagcggtactgacggtaaaacctgctcaaccg
gcgaattttgtcttccagttagaaaagcttggggaggtcgacgatcccctccggctttgc
atggtttatcgactcctgcgcgaagaagtggaagcactcgtcactcgccatgtcgagaag
gccatgccggaatcagaccattgggaacacaggatagctgtgcaagatgctatcgttcgc
aacctggaaaggagctcatcatgggtagaaatgtatgagatggcgggagagattcatttg
ccaggaggccagttaaatgtcgacggcgttcctgaagaactgctcgcgaaggttaaacaa
gaccttcagaagcgcgacgacttaatcgcagacaagagcaaatggagagaatttacaatc
cctcttgacctccctcgacttgacatcctagtttcaacacgaatagagctcgttgcgaat
cctttcaacaaggaacctctaaaacgccagcaagctcccccaatatatgccgggcaaccc
atcacagcaattgtttcaatcaacacgtcgttttattgggctggtccagacaagaaggac
atcaaagagtacacgatgcgcttccagcttgaggaaaacatgaaagactggcttattagt
gggcaaaagcgaggcgatttcaaagcaaaggatggcgacacatatacagttaccataacg
ctcatggcacttcgacacggagagttatctcttccgaacgttcgtgtggtagcctatcct
tcagacaacaatcagtccgccacgcctgtgagtcttgaggcctatcaggtacagggagct
gaacgcttgctcgtcctaccaagaggcggtagaacgacattcttcctgaacgttggacga
gagcagtag
DBGET
integrated database retrieval system
