Fomitiporia mediterranea: FOMMEDRAFT_79534
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Entry
FOMMEDRAFT_79534 CDS
T03132
Name
(RefSeq) WD40 repeat-like protein
KO
K11293
protein HIRA/HIR1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_79534
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
FOMMEDRAFT_79534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Mcl1_mid
HIRA_B
Motif
Other DBs
NCBI-GeneID:
18679930
NCBI-ProteinID:
XP_007263485
JGI:
Fomme1_79534
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MRFTKPSWVMHQDGTRNENAKRLSMFSVHVHPDGSRIATGGLDAKIRIWSTKPILNAAAD
ATNKPPKSLCTLTMHTGPVLTVRWAHSGRWLASGSDDEIIMIWDLDPTGSGKVWGLDEVN
VEGWKPLKRLPGHESDVTDLAWSPEDRYLASTGLDSKVMIWCGYTLERLFKLDMHQGFVK
GVCWDPVGEFLATQSDDRTVRIWRTTDWGLEATVTRPFEHSPGSTFFRRLSWSPDGAHIT
ASNAMNNNGYVFTAAVISRNTWTSDISLVGHENTVEVACYNPHIFLRDPQKPVVTNNICS
VVALGADDRSVSVWQTKSARPLIVAKEVFERQIMDLSWSVDGLALYAVSSDGTLAAFAFD
RNELEGIAPPAAQRQYLSKFGFSLPPLPPSFAHAEHNIHMNGHTSGRSTPPLTPPAAHQN
GFGHVSSTRPGEQVTTLVARRGPKGRDRAQRRIQPTFVGSLGGAGNVPSASTVPPTQISA
PPSSISINTNANVPAMSYLPPPPISSSVSSTGFGYTNGFDGMDVEGGGPDFGGGVDMTVP
ISALDTRGGRRSRGDTITVSYGDDNGKQPKARTLGGDRLRDTSEREAREIRRSDALGLRN
IGGPSTGSLVRETVLSTPGLKTFLSERVAETGDVLEARNSEDGKPTEITFFTSKEKTVQW
LDYLPSPVLCVCASNRICAAAMEDGAVNVYSLTGRRIMPTLMLGSPVAFLDAAKYYLMAI
TASGQVYVWNAKLSSALHPPTSLLPFLSTSPPTTDYPNGLLPTVLSASIRPNGAPVVYLS
TGTSLSYDSALLTWVRIGESWWASGSSAWKGRQRTSMSLTPGGAGNGIVASIEARVAEHM
SNNGSPSDAEKPRPTWWTAAMTLGHLESRMHAARVLGSAPEYKQALLLYAKTIADEGFRG
KAEEVLKELYGPVYW
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttacgaagccatcgtgggtaatgcaccaagacggaacgcgtaatgagaacgcc
aaacgtctctcgatgttctccgtgcacgtccatcctgacggctcgcgaatcgctacaggt
ggtctcgatgcgaagattcgcatatggtctacgaaaccgatcttgaacgctgcggcggat
gctaccaataaacctccaaagtcgttgtgcacgctgacaatgcatacgggtccggtgctt
actgttagatgggcacattcaggtcgatggctggcgagtggaagtgatgacgagattatt
atgatttgggatcttgatccgacaggttcgggaaaggtctggggtttggacgaggtgaat
gttgaaggctggaaaccgttgaaacgattaccgggccatgaaagtgatgtaacggacctc
gcgtggtcccctgaagatcggtatctagcttccaccggcctggactcgaaagtaatgatc
tggtgtggctacaccctggaacgcctcttcaaactcgatatgcaccagggtttcgtaaag
ggtgtatgttgggatcccgttggtgagttccttgcgacacagtcggacgatcgtactgtt
cggatatggcgcacgacggattggggtttggaagcaaccgtaacgcgaccgttcgagcat
tcaccagggagcacgttctttcgacggctaagctggtctcctgatggcgcacatattact
gcgtccaatgcgatgaacaataacggatatgtcttcactgctgcggtcatctcccgcaac
acttggacgtctgacatttccttagttggacacgagaatactgtcgaggtcgcatgctat
aacccgcacattttcctccgagatcctcaaaagcccgttgttacaaataatatatgctct
gtcgttgcacttggtgcggatgatcgttccgtcagtgtttggcaaacgaagagcgcgcgc
ccgctcattgttgcaaaagaggtctttgagcgtcaaataatggatctcagttggtcagtc
gacggattggcactctacgccgtgtcaagcgatggcacacttgctgcctttgccttcgac
cggaacgagctggaaggaattgcaccaccagcagcacaacggcagtatctcagtaaattc
ggcttctccctcccgcccctcccacctagctttgctcacgcagagcacaatattcatatg
aatggacacactagcggacgctcaacccctccacttacaccacccgctgcacatcagaat
ggcttcgggcacgtgtcgtctactcgacctggcgaacaagtaacgacgcttgttgcgcgt
cgtggacccaagggtcgcgatcgtgcgcagaggcgcattcagccaacttttgttggctca
cttggaggagcggggaacgtaccctcggcttcaaccgttcctcccacgcagatttccgct
ccaccgtcatccataagtatcaacacaaatgcaaacgtgccggcaatgagttaccttcct
ccacctcctatttcctcatctgtgtcatccactgggtttggttataccaatggttttgat
ggaatggacgtggaaggtggcggacctgacttcggcggaggtgtggatatgacagtcccg
atcagtgcactcgatacacgtggtggacgccgcagccgaggggatacgatcacggtttcg
tacggtgatgataatgggaaacagcccaaagcccgcacattaggtggcgatcgccttaga
gacacgagtgagagagaagcccgtgagattaggcgtagtgatgccctgggcttgcgaaat
attggcggcccgtcgacaggtagccttgtacgggaaactgttttgtcgacaccgggttta
aagacgttcctctctgagcgtgtcgcggaaacgggagacgtccttgaagctcggaactcc
gaagatggaaaaccaactgagataacgttcttcacctcgaaggagaagacggtgcaatgg
ttggactatctgccttcaccggtcctatgtgtttgtgcttcaaacagaatctgcgctgcc
gcaatggaggacggagcggtcaacgtttattcattgactggacgacgaattatgcccaca
cttatgcttggttcgcctgtggcattcttggatgcagcaaaatattatctcatggctatc
acggcgtcgggccaagtctacgtttggaacgcgaagttgtcttccgcattacatcctcca
acatctctcctcccattcctttcgacgagtcctccaacaacagattatcccaatggttta
ttgcctaccgtcctttctgcgtcaatccgaccgaacggtgcacccgtcgtgtatcttagc
acaggaacttcattaagctatgactccgcactccttacatgggtacgaatcggtgagagc
tggtgggcgagcggatcatccgcatggaaaggtcgccaacgcacatctatgtctctaacc
cctggtggagcaggcaatgggattgttgcatccatcgaggctcgtgtcgcagagcatatg
tcaaacaatggatcaccatcagatgcagagaagccacgaccgacttggtggaccgcagcg
atgactcttggacacctcgagagccggatgcatgccgctcgtgtgctcgggagtgcgcca
gaatacaaacaagcattgttgttgtatgcgaagacgattgcggatgaaggtttccgagga
aaagcggaggaagtgctgaaagaactctatggtcctgtttattggtga
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integrated database retrieval system