KEGG   Fomitiporia mediterranea: FOMMEDRAFT_79779
Entry
FOMMEDRAFT_79779  CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
fme  Fomitiporia mediterranea
Pathway
fme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOMMEDRAFT_79779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fme03041]
    FOMMEDRAFT_79779
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_79779
Spliceosome [BR:fme03041]
 Complex B
  Other components
   Prp19 complex
    FOMMEDRAFT_79779
 Complex C
   Prp19-CDC5 complex
    FOMMEDRAFT_79779
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    FOMMEDRAFT_79779
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 18679946
NCBI-ProteinID: XP_007263994
JGI: Fomme1_79779
LinkDB
Position
Unknown
AA seq 823 aa
VWKNTEDEVLKAAIAKYGKNQWARISSLLVRKTPKQCKARWYEWLDPSIKKTEWSKTEDE
KLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDEAEAKENEELGLAGPGDAGPSADD
VRKLRPGEIDPDPETKPARPDPIDMDEDEKEMLSEARARLANTQGKKAKRKARERQLEEA
RRLAMLQKKRELKAAGIIMRHKSKRGGMDYNADIPFEKKPAPGFYDTSEEQAKASVAPVG
QSLRRLENKRKPEEEEAERKKRQRRGKEGENEHQTKFVAPRDAQIQKLKEAEQIGKRRKL
VLPDAQVGEEELEEIVKIGQAGQSARALVGEGPEASEKLLGEYEGLASARMARTPRTAPQ
HDNVMTEARNLRNMIAVQTPLLGDENTPLHTAPGGGTGFEGATPRHQVAFTPNPLATPAR
QDSLGPGATPRSEFPGATPLRTPLRDNLSLNPSGAASSVGDTPRERRGRGGMSSLKSAFM
NLPRPENNFELLVPEDEEQDESTAAVPMEEDAAERDARLKRLREEEERKAFSRRSQVVQK
GLPRPVNVDVEKLLEELSLTPDDEPELGAARKLVDNEMAKLLQHDAIAFPLPGTSIAGST
RSTYEYPEDDYVDKAKALLHSELAASLGFPNTSPSQVSEGLMATATAEELDDSVLWDKQR
ETLVFDAKTSTWVDPSSLSFADRLAGYDALLRDDRDTIAKEASKVAKAEKKLGIQLGGYQ
TRFKALAKRATDAFDEMQKGQIDLASFIQLQVNEQVVGPRRVEALKREVDTLERRERHLQ
GRYQELARDKEESEARVAALEEKIMAEAEALNEAALADTFPTS
NT seq 2472 nt   +upstreamnt  +downstreamnt
gtatggaaaaacacggaagatgaggtgctgaaggcggccatcgcaaaatacggcaagaac
caatgggctcgtatatcctctcttcttgttcgtaaaacgcctaaacagtgcaaggcgcga
tggtatgagtggttggatccatcgattaaaaagacggaatggtcgaaaacggaggatgag
aaactgcttcatctagcgaagctcatgccgacgcaatggaggacaattgcacctatcgtt
ggacggactgcgacgcagtgtcttgaacggtatcaaaagttgctagatgaggcggaggca
aaggagaacgaggagctcggtttggctggcccaggtgatgctggtcccagtgcggacgac
gtacggaagctcagaccaggtgaaattgaccccgatccggagacgaagcctgcacgacca
gatccgattgacatggatgaagatgagaaggaaatgttatctgaagctcgtgcacgcctt
gccaacacacagggaaagaaagcaaaacggaaggcccgcgagcgccagcttgaggaagcc
agacggcttgcaatgctgcagaagaagagggaactcaaagcagctggtatcatcatgcgc
cataaatccaaaaggggtggcatggattacaatgcagatattcccttcgagaaaaagcct
gctccaggtttctatgatacgtcggaagaacaggcaaaagcgtctgttgctccagtgggc
caatctcttcgacggctcgagaataagcggaagcctgaggaagaggaggctgaacggaag
aagagacagcgaaggggcaaggaaggagagaacgagcatcaaacgaagttcgttgctcct
cgtgacgctcagatacagaaactcaaggaggcagagcaaattggcaagagacgaaaatta
gttcttccggatgcgcaagtcggcgaagaggaacttgaagagatagtcaagattggacag
gcgggccagagtgcccgtgctctagttggtgaggggccggaagctagtgagaagcttttg
ggagagtacgaagggctggcgagcgcacgaatggctcgtacaccacgaacggcaccgcaa
catgataatgtcatgacggaggcgcgtaatcttcgcaacatgatcgctgtacagacacct
cttttaggtgacgagaacactcctctacacactgctcctggtggaggaaccggatttgag
ggtgctactccccgtcatcaggtcgcatttacgcctaatcctctggcgactccggcccgc
caggacagtctcggccctggtgctactcctcgctctgaatttcccggcgctacgccgcta
cgaactcctttgcgcgacaacctcagcttgaaccccagtggtgcagcttcatccgttgga
gatactcctcgggagcggcgtggtcgtggtgggatgtcttcgctcaaatcagccttcatg
aatcttcccagacctgagaacaactttgagttgcttgttcctgaagacgaagaacaggat
gaatcaacggctgcagttcctatggaggaagatgctgcagagcgagacgcgagattgaag
agactgagagaggaggaagagagaaaggccttttctcgacgtagccaggtggtgcaaaag
ggtttaccccggccagtgaacgtggatgtcgaaaagctcttggaagagttgtctttgact
cccgatgacgaaccggaactcggtgcggctaggaaacttgttgacaacgagatggcgaag
ctattacagcatgatgcgatcgcatttcctcttcctggtacttcgatcgctggctcgacg
cggtccacttatgagtaccccgaagacgattacgtcgataaggcgaaggcacttctccat
tcggaattagctgcttcacttggcttcccaaatacatcgccttcgcaggtgtccgaaggt
ttgatggctactgcaacggccgaagaacttgatgatagcgtcttatgggataaacagcgc
gagacactggtgtttgacgcaaaaacatcaacctgggtggatccgtccagcctatccttt
gcagatcgattagcaggatacgatgctcttcttcgggacgatagagatacgatagcgaag
gaggcaagtaaagtagcaaaggcagagaagaagctcggtatacagcttggagggtaccag
acgcgcttcaaagcccttgcgaagcgtgcaacagatgcgtttgacgaaatgcagaagggt
caaattgacctggctagcttcatccagctgcaggtgaacgaacaagttgtaggtccgcgt
agggtagaggcattaaagagggaagttgacactttggagaggagggaaaggcacctgcaa
gggcgataccaggagctcgcgagggataaggaagaaagtgaggctcgtgtggcagcgctt
gaagaaaagataatggcggaagcggaggcattgaacgaggcagctctagcggatactttc
cctacaagttaa

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