Fomitiporia mediterranea: FOMMEDRAFT_82627
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Entry
FOMMEDRAFT_82627 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
FOMMEDRAFT_82627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_82627
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
FOMMEDRAFT_82627
INO80 complex (yeast)
FOMMEDRAFT_82627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
18680080
NCBI-ProteinID:
XP_007265455
JGI:
Fomme1_82627
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MPLPEPTEEDYRLASSDLSDCEEVWIQEMSHYYLETQKRQRQVELWFEDSCVARNNDIAR
TMSNKYSARVARIPDAVPRRLYMVPQQYGAENPLVRTPSPDFRDENGLGLEFDHSGPGFY
SGQVNYNAENEDAARELEESILGPGPSTIKLRHYDGRKRDAAIAISDDSGDERNGMTFPP
KRRRLDMDDDLMDDLERSIAGDDPQSISTAMGSRVYPGKGKGKGRATPVPSGAGSDVSQA
KAKRKPARRKGDPLSLLGHELGPDSAAASVAGDITPVPSAPPSPSSSAALIYELGDVPPP
MKRAKKVDDQIMYKRIMGLEEAQRKVWLNIARRDVAKVYKHHLAGYLTRQTQLKRTATLC
STQAKRVSARTVKSAKEAQTRAKRLMREMMVFWKKNEKEERDLRKRAEKEADNRAKEEEE
RREATRQARKLEFLISQTELYSHFVGSKLKTSEIEGEGEGESEEGTEVPQGAEGPDIDPT
SLDINFDDEDETNLLAHARKNAKEAIALAKARAVQFDTDAALERKTNEALALAKAQAHLR
DDEEEEEGANKAPGATVDFDSDELNFQNPTSLSGPLTIQQPKMLQTALKEYQLKGLNWLG
TLYEQGINGILADEMGLGKTVQSIALLAYLSEVHDIWGPFLVVAPSSTLHNWQQELARFV
PSITCLPYWGTVKQRSLFRKFWSKKNISYNKDAPFHVLVTSYNLIIQDAQYFQRIKWQYM
ILDEAQNIKNSSSARWKTLLGLQCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEF
NEWFSKDIENAAAEGKGGSRMNERQLRRLHMILKPFMLRRVKRHVQNELGEKIELDIYVN
LSPRQRALYKALRANISVAELIEKASHIGDADAARTLMNLVMQFRKVCNHPELFERADVV
APFSFSEYGRPASIAREGNFVTCHYSTRSPIDYSIPQLFYLDGGLLSVPREDAPARPERG
VLRNLLSIWATDWVQRSIEENVCSPFNFVPILGMTPGEAHSLHFSPELRRLTVAADVENK
CIEEDLYRDPHFDACDASRDRYRIPARYSMRHLDVADGLPPLHEVTRDSWSISCLSRPSL
RWFVPPVIAPHISMYSSDRNFIERQSQLLDAPEESLILFGLPPEIREIKPACDAFEQKLP
GVPLNGVLGNSPSDQLPLSYMQVPEAKRLIIDSAKLARLDELLHELKAGDHRVLIYFQMT
RMMDLMEEYLIYRQYKYLRLDGGSKMEDRRDLVMDWQTKPEYFVFILSTRAGGLGINLTA
ADTVIFYDHDWNPSNDAQAMDRAHRLGQTRQVTVYRLITKGTIDERIVQLARVKKDVQDI
VVGNKQFTDVTKPKEIVSLLLNDDELANLDKADADGSVRKADSRAGDAASQAARALMVDE
EDDFFSNSGPNNNEMGITEYGDEENGTPGPTSTRGKKRKGPGTGTRGRNKPGPKRGYKRK
PAGESIQDDF
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgccacttccagagcccacggaagaagactataggctcgcatcttctgatctgagcgat
tgtgaggaggtttggattcaagaaatgagccattattatttagagacccagaagaggcaa
cgtcaagtggagttgtggtttgaagacagttgtgtggctcgcaacaatgacatagcacgg
acaatgtccaacaaatattctgctcgcgttgcacggatacccgatgctgtgccgcgacgg
ctttacatggtgccgcagcagtacggagcagaaaatccattggttcgaacgccatcgccg
gattttcgtgacgaaaatggactcgggctagagttcgatcactctggtccagggttctat
tccggacaagttaactacaacgcagaaaacgaagacgctgccagagagcttgaggaatcc
atcctcggccctggtccttctacaatcaagctcaggcattacgacgggaggaagcgtgac
gccgcgatagctatttcggatgacagtggcgatgaacgaaacgggatgacatttcctcca
aagagacgaaggttagacatggacgatgaccttatggacgacttagaacgttcaattgca
ggcgatgatccgcaatcgatatctacagctatgggtagtagagtatacccaggcaaaggg
aaaggaaaaggcagagcaacaccggtcccttcaggagctggtagtgatgttagccaggca
aaagccaagagaaaacctgctagaaggaaaggggatcctttatcacttcttggtcacgaa
cttggtccggactctgctgctgcctccgtggcaggagatataactcctgtaccatccgcc
ccaccctcaccatccagttccgcagcgttaatttatgaactgggtgatgtaccacctcca
atgaagcgagcgaagaaagtggacgatcagatcatgtacaaacgaataatgggtttggag
gaagcccagaggaaagtctggctgaacatcgctcgcagggacgtcgcgaaggtgtataaa
catcatctcgccgggtacctaacgcgtcagacgcagttaaaacgaactgcaacgctttgc
tctactcaggcgaagcgagtatccgctcgaacagtgaaatccgctaaggaagcacagacc
agggcgaaacgtctcatgcgtgaaatgatggtcttctggaagaagaacgaaaaggaggaa
cgtgacctgaggaagcgggcggaaaaggaagcggataatagggcgaaggaggaagaggag
aggcgtgaggcaactcgtcaagctaggaaactggagttcttgatcagccagactgaactc
tactctcacttcgttggaagcaagctgaaaacttctgagatcgagggtgagggcgagggc
gagagtgaagaaggtacggaggtaccacaaggtgcagaagggcctgatatcgacccgaca
tcgctggatattaacttcgacgacgaggacgaaaccaaccttcttgcgcatgcacgaaag
aacgccaaagaagcaattgctcttgcaaaagcccgtgctgttcagtttgatacagatgcc
gcgctcgagcgaaagacaaatgaggcgcttgctcttgctaaggcgcaagcacacttacga
gacgatgaggaagaagaagagggtgcgaacaaagcacccggagccactgtcgattttgat
tcggatgagcttaacttccaaaatccgacctctttgtctggtccattgactatccagcaa
ccgaagatgctacagacagctctcaaagagtaccaactcaagggcctgaattggcttggt
acactctacgaacagggtatcaatggtatattggccgatgaaatgggactgggaaagacc
gttcaatcaatcgctctcctagcttatttgtccgaggtccatgatatttggggaccattc
cttgtcgttgcgccgtcttctactctgcataactggcaacaagaattggcaaggttcgta
ccgtcgattacgtgcctcccatattggggcaccgtgaagcaacggtcactcttccgaaag
ttttggagcaagaagaatatcagctacaacaaggatgcaccgttccatgttctggtgaca
agttataatctgatcattcaagatgcccagtactttcagcgcatcaaatggcaatacatg
atcttagatgaggcgcagaacatcaagaactcgtcaagtgcacgttggaaaactcttctt
ggtcttcagtgcagaaatcgcctgctcctaacgggtacgcctatccagaataacatgcaa
gagctctgggctctactgcacttcatcatgccaagtttgttcgactcccacgacgagttc
aatgagtggttctcgaaagacatcgagaacgcagccgccgaagggaagggaggaagcaga
atgaatgaacgtcaacttcgccggttgcatatgattttgaagccgttcatgttgcgtcgt
gttaagcgccatgttcaaaacgaactcggagagaagattgaactcgatatctatgtcaat
ctcagcccacggcagagggccttgtacaaagctcttagggcaaacatctccgttgcggaa
ctcatcgagaaggcatcgcacattggtgatgcagacgcagcgcgcactcttatgaacctt
gtgatgcaattccgcaaagtttgtaaccatcccgagctcttcgaacgcgctgatgttgtt
gcaccattttctttctcggagtatggtagacctgcatcgatagcacgcgagggcaacttt
gttacgtgccactactcgacgcgtagtcccattgattactcgattccacagcttttctac
cttgatggtggcttgctgtcagtaccacgcgaggatgcacctgctaggccggaacgtggg
gtgttgagaaacctactgagcatatgggcgactgattgggtacaacgatctattgaagaa
aatgtctgttcacccttcaatttcgtccctattcttggtatgactccaggcgaggctcac
tccttgcacttctcaccggaattgcgacggcttaccgtcgcagccgatgtcgagaataag
tgcattgaagaggatttgtatcgggatcctcatttcgatgcttgtgatgcttcgcgtgat
cgatatcgaatcccagcgcgttattccatgcgacaccttgatgttgcagatggacttcct
cctctgcacgaagtcacccgagacagctggtctatatcctgtctgtcacgaccatccctt
cgatggttcgtcccaccggttattgcgccacacatatctatgtactcctcggatcgcaac
ttcattgaacgacagagccagcttcttgatgcacccgaggagtccttaattctcttcgga
ttaccaccagaaatccgagaaatcaagccagcttgtgacgcattcgagcagaagctccct
ggtgttccgcttaatggcgtcttgggcaactccccatcggatcaactgcccttgtcctat
atgcaggttccagaagcgaaacgtctaattatagattctgccaagctggcgcggttggac
gaattgcttcatgagcttaaggctggagaccatcgtgtcttaatttatttccagatgacg
aggatgatggaccttatggaggaataccttatttatcggcaatacaagtatctgcgtctg
gatggtggttcgaagatggaggaccgtcgtgacctagttatggattggcaaacgaaacct
gagtacttcgttttcatactaagtacaagagctggtggtctcggtattaaccttacagct
gccgacactgtcatattttatgatcatgattggaatccttcgaacgacgcccaagctatg
gatcgagctcaccgtctcggacagacaagacaagtcaccgtttacagacttatcacgaag
ggcacaattgatgagcggatagtgcagcttgctcgtgttaagaaagatgtccaagatatc
gttgttgggaacaagcaattcaccgacgtcacgaagccgaaggagattgtttcactactc
ctcaacgacgacgagctggctaacttggataaggctgacgcggatggttcagtacggaaa
gccgacagtcgggctggcgacgcggcttctcaagctgctcgtgcactcatggtggatgaa
gaggatgacttctttagtaacagtggtcctaataataatgagatggggatcacggagtat
ggtgacgaggagaatgggacaccaggcccaacaagtacacgtgggaagaagcgaaaagga
ccaggcactggcacgcgtgggcgtaataagcctggtccaaagaggggatacaagaggaaa
ccagctggagagtcgatacaagacgacttctag
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integrated database retrieval system