Fomitiporia mediterranea: FOMMEDRAFT_82947
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Entry
FOMMEDRAFT_82947 CDS
T03132
Name
(RefSeq) DCP2-domain-containing protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOMMEDRAFT_82947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_82947
Enzymes [BR:
fme01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
FOMMEDRAFT_82947
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FOMMEDRAFT_82947
mRNA degradation factors
5'-3' decay
Decapping complex
FOMMEDRAFT_82947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
18680099
NCBI-ProteinID:
XP_007265565
JGI:
Fomme1_82947
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MASSSSSSSPEISHSAPTFDPSFFSDASLDEVLEELSTRFIMNLPDQELESVERMCFQVE
QAHWYYEDFMREANPKLPSLTLKRFSSIFFNSCPLLRQWSAEHEQYFNTFMQYKVRVPVC
GAIMLNDKWDKCILVKGWKSSAGWSFPKGKINQNEPAHECAAREVVAEETGFNISEYIRP
KDCIEMTIREQRVTLFIVGGIPEDYPFHTRTRKEISKIDWFKLSDLPSWKRNKQVPGKFY
LISPFVQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcctcttcatcatcttctccagaaatatcacactcggccccgacctttgac
ccttccttcttctcagatgcctcgctcgacgaggtgctcgaggaattatccactcgattt
atcatgaatcttccggatcaagagttggaatccgttgagcggatgtgcttccaagtcgaa
caagcgcactggtactacgaggattttatgcgcgaagcgaatccaaagcttccaagcttg
acgctcaagagattttcttccatcttttttaactcatgtccccttcttcgtcaatggagc
gccgaacacgagcaatacttcaacacctttatgcagtacaaggttcgcgttcccgtgtgt
ggcgcgatcatgctcaacgacaaatgggataagtgtatacttgtgaagggctggaagtcg
tccgcaggctggagctttcctaagggaaagatcaaccagaatgagccagcacacgagtgt
gcagcacgcgaggtagtcgcagaagaaaccggtttcaacatctctgaatatattcgccca
aaggactgcattgaaatgacgataagagagcaacgggtgacgcttttcatcgtaggaggg
atccccgaggactatcccttccatactcgtactagaaaggagatcagcaaaattgattgg
tttaagctttcggacctcccttcttggaagcgtaataaacaagttcctgggaagttttat
ttgatttctccttttgtccagtga
DBGET
integrated database retrieval system
