Fomitiporia mediterranea: FOMMEDRAFT_83765
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Entry
FOMMEDRAFT_83765 CDS
T03132
Name
(RefSeq) RNase Gf29
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_83765
Enzymes [BR:
fme01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
FOMMEDRAFT_83765
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FOMMEDRAFT_83765
Prokaryotic type
FOMMEDRAFT_83765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
18680155
NCBI-ProteinID:
XP_007265407
JGI:
Fomme1_83765
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MISVASLAVFVFAAVVSSTPFSNPVETFELFKRVSSQCSASGQTSCHNTTAQDTCCFESP
GGLLLQTQASFWDTDPSTGPTDSWTIHGLWPDNCDQTFEENCDPSRAYKDIAGLLTDAGA
TDTLSFMQTNWVDINGNDETFWEHEWSTHGTCMSTLEPDCIENYTTGEEAVAFFETVVKL
FKTLPTFTFLSNQGITPTTSKKFTYSDLTNALQAEAGVVPALNCDGSTLDEIFWYFNLKG
SVIDGSFVAIDAPSKGSCPSSGISYPPKSGSGSPTSVSGANPGGLPAKATITAQQSTGGS
LGGLLSAGTWSTQTLATYTLSGSSSSFTMKSSKGNCGVSSGTLTCGSGVSASSFSAVTSG
SSLLLAFSGSTEFSSNTAPSGETQETVFPGSSHTQKFTLVINAS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgatatctgtagcatcccttgccgtctttgtgttcgctgctgttgtctcgtccactcct
ttctcaaatccagttgaaacgtttgagctcttcaagcgcgtttctagccaatgctcggca
tcagggcagacgtcatgtcacaatacgactgcccaggatacctgttgcttcgagtctcct
ggaggccttcttcttcagacacaggcaagtttctgggacacggatccatctaccggccca
actgattcatggactatacacggtctttggccagacaactgtgatcagacgtttgaagag
aattgcgatccttctcgcgcgtataaagacattgctggattactcacggatgcaggagcg
acggacacactttcatttatgcagacgaattgggtcgacattaatggcaacgatgaaact
ttctgggagcatgaatggagcacgcatggtacttgtatgagcacgttggagccggactgc
atcgagaactacactaccggtgaagaagctgttgcgttttttgaaacggtagtcaagctc
ttcaagacactcccaacatttacgttcttatccaatcaagggattactccgacgacaagc
aagaaatttacctattcagatctcactaatgctctccaggcagaagcgggagtagttcca
gcgttgaactgtgatggaagcacactggatgagatcttttggtacttcaatcttaagggc
tctgttattgatggatcatttgttgcaatcgatgcaccatcgaaagggtcgtgccctagt
agcggcatatcctacccaccgaaatctgggtcaggatctcccacaagtgtaagtggagca
aacccaggaggtcttcctgcaaaggcaaccataacggcacaacaatcgactggcggctct
ctcggaggtttattgtctgctggaacgtggtcgacgcaaacgctcgcgacatacaccctc
tcaggaagctcgagtagttttacgatgaagtcttcaaagggcaactgtggcgtatctagc
ggaactctcacttgtggtagtggcgtatctgcttcatctttctctgcagttacctcgggt
agcagtctgctccttgcgtttagtgggtcgacggaattctcgagtaacactgctcccagt
ggcgagactcaggaaactgtattccctggaagcagtcacacacagaagtttactctcgtc
atcaatgcgtcgtag
DBGET
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