Fomitiporia mediterranea: FOMMEDRAFT_83835
Help
Entry
FOMMEDRAFT_83835 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_83835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_83835
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_83835
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOMMEDRAFT_83835
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FOMMEDRAFT_83835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
MarR
Motif
Other DBs
NCBI-GeneID:
18680160
NCBI-ProteinID:
XP_007265116
JGI:
Fomme1_83835
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MEEEEEPIPWAKQLNLEPHRVHVMQTSLFRVPELSKPETKDSFSFLKHQRPSDVHKEPQT
RNRTSFAQPRSKPPPRKYARISLSESVSAKRENMFLDAGLSMGRSFRVGWGPGNKLVHVG
QLSSGASSSKLGNSSEVGLTTLRVAQTSSPDLLQHLLSHSEIVAPSVENGNTPYATLRAA
VSFSSFSSLFTAQDKSHCASVFRLGHALFDPLDLHLQEDAPADVRNRISALRRVDALSAW
LSRTVSSSVEQDIKAVASNDSAQVAFLYLTGNQVEKAVEALMNGGNVRLATIISQIPGDA
EFREDILEQLQIWKEEKEDAFMRNSIRKLYALAAGEVDVLEGSSWRENIDVPKDLDWLRV
LGLQLWYSSSLNTPLRETFGVYEQIVQAAHGRVGFPKPFYSTSTSGASEAKDGLFNLMKL
SVSSSMTLESALDPVSFSSNPRDFRMSWFLYILLARCLRVRDFTDRQLYDAMEDDTITTQ
ELEGYSQVANALTTNFAAQLQQEGLVQEAAYVLLFLEDDVGRKRAIKELLAQSAPLLNEY
TTQGLHGSLRIPMEWIDEAKATHAFYSGDVYGAYELYRDAMAHRAAHELAITYLAPEAVL
RDELGVLKRLFASLDASLIDDFGVGGQLFIDYARIVSRVPKLKSNSLAADAVPDVAEQSE
LEALTGRIPQLIGVLPDVLHDKPGTDDQCKAALSHMLSRLLECVDPSSPVRLSPFELVAS
NACLILINISDEGRDSTRVG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagaagaaccgattccgtgggcgaagcaacttaatcttgagcctcacagg
gttcatgtcatgcagacatcgctgtttcgcgtgccagaactatcaaaaccggaaacaaag
gattcattctcttttctgaaacaccagcgaccctccgatgtgcacaaggaaccacaaacg
cgaaatcgcacttcgttcgcacagccgcgctcgaaaccacctccacgaaaatacgcgcgc
atttcattgtcagaatctgtcagtgctaaacgagagaacatgtttctcgatgcgggttta
agcatgggtcgctcatttcgggtaggatggggtccaggtaacaagctagtacatgtaggg
cagttaagttctggggcttcgtcatcaaagctcgggaactcttctgaagtcggtctcacg
actcttcgagttgcacagacaagttccccggatttgctgcagcacctcctttctcattca
gagattgtggctccttcagttgaaaacggcaacactccgtacgcaacactaagggccgct
gtctcattctcctccttctcgtctcttttcaccgcccaagacaagtcgcattgtgcttcc
gtttttcgattaggccatgcgctcttcgatcctctcgatttgcatttgcaggaagacgct
cctgccgatgtacgaaatcgtatctcagcgcttcgtcgagtagacgccttgtctgcgtgg
ctgtccagaacagtatcatcatcggttgaacaagacatcaaggctgtcgcatctaatgat
tctgctcaagtggccttcttgtatttaactgggaatcaagtcgaaaaagctgtcgaagct
ctaatgaacggaggaaatgttagactcgctacaattatatcccaaatacccggagatgct
gagttccgcgaagatatcctcgaacaactacaaatctggaaagaggaaaaggaggacgcg
ttcatgcgtaattcgattcgcaaactatatgcgctagctgcaggagaagtcgatgtatta
gaagggagcagctggagagagaatattgacgttccaaaagatcttgattggttacgggtt
ctcgggttgcagctctggtactcgagctcattaaatacgccgctacgagaaaccttcggg
gtttatgaacaaattgttcaggcggcccatgggagggtgggattcccaaaaccgttttat
tccacatcaacctctggcgcatccgaagcgaaggacgggctcttcaacctcatgaaacta
tcggtatcttcttcaatgaccctagaatccgctcttgacccagtgagcttttcttccaac
ccgcgtgatttccggatgtcatggttcttgtatattcttctcgcacgctgccttcgggtt
cgcgatttcacggaccgccagctatatgatgcgatggaggatgacacgattactacacag
gaacttgaggggtacagtcaggtggcaaacgccctgacgacgaactttgccgcacagttg
caacaagagggtcttgttcaagaagcagcatatgtgcttttattcctagaagatgacgtt
ggtcgtaaacgcgcaattaaggagctgttagctcaatcagcccctttattaaatgagtac
acgacacaggggctgcatggtagtttacgaataccgatggagtggattgatgaggcaaag
gctactcatgcgttctattcgggtgacgtatatggagcatatgagctttatagagatgcg
atggcgcaccgcgctgctcacgaacttgcaattacttacttggctccggaagcagtattg
agagatgagcttggtgtcctcaaacgtctctttgcttcacttgatgcgagtctcatagac
gattttggagtcgggggtcagctattcattgactatgctcgtatcgtctcacgggttccc
aagctaaagagtaactcattggcggcggacgcagtgcctgacgtggctgaacaatccgaa
ctggaggcgctgactggtcgaataccacagctcatcggagtattgccggatgttctccat
gacaaacctggtacggatgatcaatgcaaagcggccttgtcgcacatgctttccaggcta
ctggaatgcgtcgatccgagttcaccggtgcgtttatctccgtttgagttggtagcatca
aacgcgtgtttgatactcatcaatatatcagatgaaggtcgagattcaaccagggttggt
tga
DBGET
integrated database retrieval system