Fomitiporia mediterranea: FOMMEDRAFT_85023
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Entry
FOMMEDRAFT_85023 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14816
pre-60S factor REI1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_85023
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
FOMMEDRAFT_85023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_jaz
zf-met
C2H2-zf_KIN17
zf-C2H2_4
zf-DBF
Zf-C2H2_ZNF451_2nd
zf-C2H2
Rtf2
DUF4727
Motif
Other DBs
NCBI-GeneID:
18680243
NCBI-ProteinID:
XP_007266714
JGI:
Fomme1_85023
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MAAIAQYSGGIQANEQIMFTCLSCSIAFPSAEDQRIHYRSDHHRYNMKRRVANLPPVSAA
VFNQKVLDRRQETAIMASSKGSVCEVCSKTYTTENAYRSHINSKKHRENELKAASRDQDV
PKPAVKEGSDEGSSTNADEKESNAAGPSKPILTVSADATEEEIAQTIDQKIAAARSRLSP
QHCLFCPLHSPSLEDNLTHMSTAHSFFIPDAEYLVDLPGLITYLGEKIAVGNVCIYCNTR
SRDFRSLDAVRKHMLDKSHRKIAYDSVKERLEYSDYYDFSSSYPDYEERTRKKEENAEWE
DVEDDDAEVDEVVDEDGSPVPSSTEDEDSSSFEEDDDELPGEQLTYGDSNFELVLPSGAR
IGHRSMRRYYAQSFPRTSLTAHNGKDEDPNSGAALVRRLIADKNSALVPRKGGFGAFGSG
TDVVKARNRGEAKEAGRHVREFRDQRRREQFKTKIAYINNNQKHFRDPLLQVTIHSLPLF
ARTSTHSTSLLNSEFLCQQTPIAYPVSISVSIHRQEHVII
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaatcgcgcagtattccggcgggatacaagctaacgagcaaattatgttcaca
tgtctatcctgttccatagcatttccttcagccgaagatcagagaattcactatcggtcg
gaccaccatagatacaacatgaagcgacgagtagcaaaccttccacctgtctctgctgcg
gtgtttaatcagaaggtacttgatagacggcaggagactgctattatggcgtcttccaag
ggatctgtgtgtgaagtttgcagcaaaacctatacgactgagaatgcctaccgctcgcac
atcaattcgaagaagcacagggaaaacgagttgaaggctgcttcaagagaccaagacgtt
ccgaagcccgccgttaaggaaggatcagacgaaggctcctccacgaacgcggacgaaaag
gagtcgaacgcagcaggaccctcaaagcctatattaacagtttccgctgacgccacggaa
gaggaaatcgcacaaaccatagaccagaaaatcgcagcggctcgttcgcgtctctcccct
caacactgtctcttctgtccactgcactcgccttcactggaggataacctcacacacatg
tccaccgcccattccttcttcataccagatgccgaataccttgtagatctcccgggactc
ataacgtatctcggtgagaagatagctgtaggtaacgtatgcatatactgcaatacacgg
agccgagatttccgctcgttggatgcggtgaggaaacacatgctcgacaagagtcatcgc
aagatcgcatacgactccgtgaaggaaaggttggaatattcggattactatgatttctct
tcgagttatccagattacgaggagaggacgagaaagaaggaagagaacgcagaatgggaa
gatgtggaggatgacgatgcagaagtagatgaagtcgtagacgaagatggatctccagtc
ccttcatcgactgaagacgaggattcatcctctttcgaagaagacgacgacgaactacca
ggcgaacaactaacctatggcgactccaacttcgagctagtcctcccgtcaggtgcacgt
atagggcaccgttccatgcgtcgctactacgcacaatccttccctcgtacatcccttacc
gcacataacggtaaagatgaagaccccaattcaggtgccgccctcgtccgccgtctcatc
gcagataagaattccgcacttgtaccacgcaaaggcggctttggtgcattcggcagtggg
acggacgtcgtcaaggcgcgcaatcgtggtgaagccaaggaagcgggccgacacgtccgc
gagttccgtgatcaacgacgtagggaacagttcaagacgaagattgcatacatcaacaat
aaccaaaagcattttcgcgatcccttgttacaagtaactattcattctctacctcttttt
gcacgtacctcgactcactccacctccttacttaatagtgaatttctatgtcaacaaact
ccaattgcatatcctgttagtatttctgtctccatacatcggcaagagcatgtaataatt
tag
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