Fomitiporia mediterranea: FOMMEDRAFT_85334
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Entry
FOMMEDRAFT_85334 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
fme
Fomitiporia mediterranea
Pathway
fme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOMMEDRAFT_85334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_85334
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_85334
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
FOMMEDRAFT_85334
Coactivators
SAGA/TFTC/STAGA complex
FOMMEDRAFT_85334
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
FOMMEDRAFT_85334
STAGA complex
FOMMEDRAFT_85334
TFTC complex
FOMMEDRAFT_85334
SAGA complex
FOMMEDRAFT_85334
SLIK complex
FOMMEDRAFT_85334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
18680266
NCBI-ProteinID:
XP_007266903
JGI:
Fomme1_85334
LinkDB
All DBs
Position
Unknown
AA seq
105 aa
AA seq
DB search
LRRSIQDLVFSIDPNVKVEPDVEDLLLDIADEFIDSVTNFGCRLAKHRGGDSLEVRDLQL
HLGEPSPSTFQIIANKANEYQNETTTSVSQASLQTKLDYRSHSLS
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
ttgcgacggtctatacaggaccttgtttttagcattgatccgaatgtcaaggtcgagcct
gacgttgaagatctattgctagacattgcagacgagttcatcgactctgtgaccaacttt
ggctgccgactagcaaaacaccgaggaggagactctttggaggtccgggatcttcaactt
catcttggtgagccttcgcccagcaccttccaaattattgctaacaaagcgaacgaatat
cagaacgaaaccacaacatccgtatcccaggcttcgcttcagacgaaactcgactatcga
tctcacagtctgtcatag
DBGET
integrated database retrieval system