Fomitiporia mediterranea: FOMMEDRAFT_87475
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Entry
FOMMEDRAFT_87475 CDS
T03132
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FOMMEDRAFT_87475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fme02000
]
FOMMEDRAFT_87475
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_87475
04090 CD molecules [BR:
fme04090
]
FOMMEDRAFT_87475
Enzymes [BR:
fme01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
FOMMEDRAFT_87475
Transporters [BR:
fme02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
FOMMEDRAFT_87475
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FOMMEDRAFT_87475
CD molecules [BR:
fme04090
]
Proteins
FOMMEDRAFT_87475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
ABC_ATPase
AAA_18
Zeta_toxin
nSTAND3
DUF87
AAA_15
AAA_28
AAA_5
AAA_30
PRK
nSTAND1
Motif
Other DBs
NCBI-GeneID:
18680371
NCBI-ProteinID:
XP_007267300
JGI:
Fomme1_87475
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MSSERSSTYKSYVDSKLSRARLEQTPQLPTQRAYTPPTPSIRLLFSRISRQDLLVIVLPA
VLSSLVAGGVAPFMTVVVGSVFDAFANFPLSNASDAERHTLLKGVGFAAIELAALAVGAI
ALGSITSALWISAGERNVMRIRSQVYAAVSSRDMEWFDMKMGAEDPSAASGVNGTIGAGG
LMAKFNRDTDDVRMASSLTSGLLLQYLTTCVTCLILAFIRSWALTLVILSAVPALMIIQI
VSQRFSGPLIGVEREQTAVAATFIERAVAAISTVKAFNAQSAEQASLSPVLVAIGSVTVR
INAVFGMTSAFSQFASMAMFVQGFWFGAHLVRNGSASAGDVMAVFWACLIAASNLQMCIP
QFVTLARGKFAMVALVSLIDPPPQQPEQDMPRNSMASASSPSSLMPKCRTTSIQTLRKIQ
PARCMGEFSLHEVTFAYPSRSSVPVLRDVSLYFPASETTFVVGGSGSGKSTIAQLLARLY
TPAFGVIALDDQDVSYIDEQWLRSHVAVVSQSCILFDGSVHDNVAMGVAGLRRQPKDVTR
DEVVAVCTAALMHEFVRDLPDGYDTRLGNGGANLSGGQKQRLAIARAMLRDPTVLVLDEA
TSALDATSRVLVFEAIKECRKNKTTIVITHDLSQITPGDFVYVLKDGGVVEQGYRSDLEE
PLPDGSDGAFRAMMRSQGAQGGFVPKRESQIADADPTGAAIPEDVERILERSDAEKQEED
ESDNRRLTMLGLPPQRKAHQSVGISAWMLDVVSDLSRQRTVREKQPTVAPPSYKATTTLH
KHQSLGPTSVVKLTKRQSSAPLKKTEPASGNIRRHFSLQFTPSSPGANFQRSVHDIFESH
RHEEEEFDDEDEIEQELEKTALERMAAEALRQRQRRAAVKRIQWTEVKLDNVVVDAPTSR
DDAPRESTSFFALIRDVYPTVPNKPVILIGLVICVLSGALTPIFSFLLSRLLFQVSIGAE
NVRTINVLGGIVLAVAACDGLLIGLKFFVMESGAMTWITRIRKACYARLLAQDKSFFDRS
DNNAPQIVQRLMKDGDDARNLISVVLAQCLAVSAMLGVGLVWALVQGWQLTLAGFAIAPV
FAVAMSVQANLVARAERRNKTAREEIARAYYECISNIRAIRCMSFENVFQNQFEESIMRA
YRTGIRGAFVEGCSFGVANGLIYFAEALLFFIGAVLVANGTYSYLQMVEVLNLVVFTVTI
GAQLMGFTQKIARATQATRDLNKILFLSTDTEESRGSAMPPIQGDIKFNDVDFSYPERSD
VPVLQSTSLRFKQNECIAVVGASGSGKSTIAALLQRLYEPNSGSITIGGNSLHAMDVKHL
RAHIAVVSQSPNLFDASIAENIAYGNAGLSPADVCYAAQAARVHDFIMSLPQGYETHVGE
NASLISGGQAQRLAIARALARPARVLILDECTSALDPESQAAVMETIRSVKVGRTTLVVT
HKLPVMRLCDRIVVIDAGSVAEEGTYDELIASNGMFAQLARGGEWMGE
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgaacgctcgtcaacttataagtcgtatgtcgactcgaagttgtctagggcg
aggctggaacaaacgccgcaactaccaactcaaagagcatacactccaccaactccatct
atccgcttgctgttctccagaatatctcgccaagatctcttagttatcgtcttacctgca
gtactctcatctcttgtcgcgggtggtgttgcaccttttatgacggttgtagtgggttcg
gtcttcgacgcatttgcaaactttccgctttccaatgcatccgacgcagaacgacatacc
ctccttaaaggtgttggatttgccgccatagaacttgctgctcttgctgttggtgctatt
gccctcggcagtatcacctccgcactctggatctcagccggagaacggaacgttatgcgc
attcgctcccaggtttatgctgctgttagttcccgagatatggaatggtttgacatgaag
atgggtgcggaagatccctcggcggcttcgggagtaaatgggactattggagctggtggc
ttgatggccaagtttaatcgggatacagacgatgtacgaatggcgagctcccttacgtcg
gggctgctcttacaatatctgactacatgtgtcacttgccttatcctcgcatttatccgt
tcctgggcactcacccttgttattttatctgctgtaccggcgcttatgatcattcaaatc
gtgtctcagcgtttctctggaccgctcatcggcgtagagcgcgaacaaactgcagtcgca
gcgaccttcattgaacgcgctgttgcagcaatctccactgtcaaggcgtttaacgcgcag
tccgcagaacaggcctcgctctctcccgtactggtcgcgataggctcagtcactgtgcga
ataaacgcagtcttcgggatgacaagcgcctttagccagttcgcatctatggcaatgttt
gttcaaggcttttggttcggcgcacaccttgtccgaaatggatcggcctcagcaggcgac
gtcatggccgtgttttgggcctgccttattgcagcaagtaacttgcagatgtgcatcccg
cagtttgtcacgcttgcaaggggaaaatttgctatggttgcgctcgtatcgcttatcgat
ccaccacctcaacaaccagagcaagatatgccgcgcaactccatggcgtcggccagctca
ccttcgtcgctcatgcctaaatgtcgaacaacctctatacaaacgcttcgcaagatccaa
cccgctcgatgtatgggtgaattctcattgcatgaggtgacgttcgcatacccttcgcgt
tcctcggttccggtgttacgagacgtctctctgtatttcccagcgagcgagacgacgttt
gtcgttggtggatctggatcaggaaaatcgactattgcacagcttctggcgcgtctatat
acgccagcttttggtgtaattgccttggacgatcaagacgtgtcttatattgacgagcaa
tggctccggtcacatgttgctgtcgtcagccagagctgtatactcttcgacgggtccgta
catgataatgtcgcgatgggcgttgcagggttacgacgtcaaccaaaagacgtgactagg
gatgaagtagttgcggtgtgcacggcagctcttatgcatgaatttgtaagagacctccca
gatggatatgatacgaggctaggaaatggtggagcgaatctgtctggtggacaaaagcag
cgcttggcgattgcgcgcgcgatgcttagggacccgacagtacttgttctcgacgaagcg
acatctgcgctggacgcgacgtcacgcgtactcgtctttgaagcaattaaagaatgtcga
aagaataaaacgactattgtgatcacacacgacctatcgcaaatcactcccggagacttc
gtatacgtgctcaaagatggaggtgttgttgagcaaggttatcgctccgacctcgaagaa
cccttaccggacgggtcagacggggcattccgtgcaatgatgcgttcgcagggagcgcag
ggcggtttcgtaccaaagcgggaaagtcagattgctgatgcggatccgacgggtgcagca
attcctgaggacgtagagcgtatactcgaacgatcagatgcggagaaacaggaagaagac
gaatcggataataggaggctgacaatgctcggcttacctccgcaaaggaaagcgcaccag
agtgtgggcattagcgcgtggatgcttgatgttgtatcggatctttcgcgccagcgtact
gttcgagagaagcagcctactgttgcaccaccctcgtacaaagcaacaactacactgcac
aaacaccagagccttggtcctacttctgtggtgaaacttacgaagcggcaaagctctgcc
ccattgaagaaaacggaaccggcgagtgggaatatacgtcgacacttttccttgcagttc
acgccgtcgtcacctggagcgaatttccagcgttcagtccacgatatttttgaatcacat
aggcacgaggaggaagaatttgacgacgaggatgaaatagaacaggaactggagaagacg
gctctagagcgtatggccgctgaggcgcttcgacagcgtcaacgacgcgctgctgtgaag
aggattcagtggacggaagtcaagctcgataacgttgttgttgatgcgcctacgtcgcga
gatgatgctccgcgagagtcaacctctttctttgcgcttatccgagatgtctaccccacc
gtaccgaacaagcctgtcatcctcattggactggtcatctgtgtgttgagcggagcttta
acccccatattctctttcctcctttcgaggctactcttccaagtctcaattggtgcggag
aacgtgcgaaccatcaatgtgcttggtggtattgtcctcgctgtagccgcctgtgatggc
ctcctcattgggctcaaattctttgtcatggaaagcggtgcaatgacctggatcacacgt
attcgaaaagcatgttatgcccgtctacttgcgcaagacaagtccttcttcgaccgttcg
gacaacaacgcaccacaaatcgtgcagaggctcatgaaggacggtgacgatgcgaggaac
ctaatttcggtagttctggcgcagtgcttggctgtatctgctatgctgggtgtcggtctc
gtttgggcgttggtacaaggatggcagctcacgcttgctggctttgctattgcaccagtg
tttgctgtggcgatgtctgtacaagcaaacctggttgctcgtgcggagaggagaaacaag
actgcccgggaggaaattgcgagggcctattatgagtgcatctcaaatatccgtgccatc
cgatgcatgtcctttgaaaatgtcttccagaaccaatttgaggaatccatcatgcgtgct
tacaggactggtatacgtggcgctttcgttgaaggctgctcgtttggcgtcgcaaacggt
ttgatttacttcgcggaggctcttctattctttatcggtgcagttctcgtcgcgaatggg
acgtattcgtatctgcagatggttgaagtcctcaacctagtcgtctttacggtcaccatt
ggtgcacagctcatgggtttcacccaaaagattgcgcgagcgacgcaggctacgcgagac
ctcaacaagatcttatttcttagcaccgacaccgaagaatcccgcggaagtgcgatgcct
cctatacaaggcgacatcaagttcaatgatgtagacttctcctatcctgaacggtctgat
gttcccgtcctccagagcacgtctcttcggttcaagcaaaacgaatgcattgcagtcgtt
ggcgcatcgggctcaggcaaatccacaatagcagctctcttgcaacgattatacgaaccg
aactcaggatcgattacaataggcggaaacagtttacatgcgatggatgtcaaacacctc
cgtgcgcatatcgccgttgttagccaaagccccaatcttttcgatgcgtccatcgcggag
aacattgcatatgggaacgcagggctctcacctgctgatgtctgttacgctgcgcaagcg
gcacgcgtgcacgacttcattatgtctctgccacaagggtatgaaacacatgtaggagag
aacgcctcactgatctctggaggccaagcccagcgactagctatcgcacgggcactcgct
cgtcctgcacgtgtactcatcctagatgaatgcacaagcgctctggatccggagagccag
gctgcggtcatggagacaattcgttctgtgaaagtcgggaggactacgcttgtggtaaca
cataaactacctgtgatgcggctctgtgatcggattgtcgttattgatgcaggctcggtc
gccgaagaggggacatatgacgagttgattgcgtcgaatggaatgtttgcgcagcttgcg
agaggtggagagtggatgggcgaatag
DBGET
integrated database retrieval system
