Fomitiporia mediterranea: FOMMEDRAFT_90179
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Entry
FOMMEDRAFT_90179 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14545
ribosomal RNA-processing protein 7
Organism
fme
Fomitiporia mediterranea
Pathway
fme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOMMEDRAFT_90179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_90179
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FOMMEDRAFT_90179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP7
RRM_Rrp7
RRM_1
Motif
Other DBs
NCBI-GeneID:
18680543
NCBI-ProteinID:
XP_007268958
JGI:
Fomme1_90179
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MGNLPETISGFAVLPAVYSKDATHILYAKIHTAQKKTTDRPVSDVLPKERTLFLVNIPPD
ATERELSLFFKPDGLVEKVVFDQRAAEEEALNAIDESESEAEEPNDESMDVDEERPVKRA
KKVKDKNQRPTLVSLPPSSLRTFRRTGRTAFVVFLDSSSLSKALSPPHTPRPWPQSTEHR
GLLHYKTLHSAMRPPLDVVRTHAESAIALYDYEEQQRKKKCQYRKGEAIVDEDGFTLVTR
GGAYGQTLGGGVAIASKRFQVTGETSERVKGKKKKKQGMEKEGFYAFQKHEKKRQELIDL
KKKWQEDLEKVQKLKESKRYKPY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatctacctgaaaccatctcgggatttgctgttttacctgctgtctactcaaag
gatgcgactcatatactctacgctaaaatacacactgctcaaaagaaaactacagacaga
cctgtatctgacgtcttaccgaaggagcggacactgtttctcgtgaacatcccacctgac
gcgacggaacgcgaactttcactctttttcaagccagatggtttagtagagaaagttgta
ttcgatcaacgtgcggcagaggaagaggcactcaatgccattgacgagagcgaaagcgag
gctgaagagcccaatgatgagagcatggacgtagacgaagaacgtcccgtgaaaagggcc
aagaaggtgaaggataaaaatcaacgaccaactcttgtatcattgcctccctcgtctctg
cgaacctttcgcaggacaggtagaacagcattcgttgtttttctggactcttcgtctctt
tccaaagctctatcaccaccccatactccgagaccttggccacaatctaccgaacaccgg
ggcctattacactacaaaacgttgcattcagctatgcgacctccgctcgatgtagtgcga
acacatgcagaaagtgccattgctctgtacgattacgaagagcaacaacgaaagaagaag
tgtcagtaccggaaaggcgaagcaatcgtcgacgaagacggcttcacattggttacacgt
ggcggggcgtatggtcagaccctgggtgggggagtcgctatcgctagcaagcgcttccag
gtgacgggcgaaacatccgagcgtgtaaaaggaaagaagaaaaagaagcagggtatggag
aaagaaggcttctatgccttccaaaagcacgagaagaagagacaagaattgatcgatctc
aagaaaaagtggcaagaggacctggaaaaggtccagaagctcaaggaatcgaagcgatac
aagccatattga
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