Fomitiporia mediterranea: FOMMEDRAFT_91457
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Entry
FOMMEDRAFT_91457 CDS
T03132
Name
(RefSeq) mago nashi domain-containing protein
KO
K12877
protein mago nashi
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
fme03015
mRNA surveillance pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_91457
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_91457
03015 mRNA surveillance pathway
FOMMEDRAFT_91457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_91457
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_91457
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FOMMEDRAFT_91457
Spliceosome [BR:
fme03041
]
Complex C
Other components
EJC/TREX
FOMMEDRAFT_91457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
18680611
NCBI-ProteinID:
XP_007269178
JGI:
Fomme1_91457
LinkDB
All DBs
Position
Unknown
AA seq
135 aa
AA seq
DB search
TGHSGKHGHEFLEFEYSHGRLRYANNSNYRNDSLIRKEMWIGPLVVKELKRIVESSEIIK
EDDQNWPKKNIVGKQELEIRVGNDHIAFETAKIGSLVDVQDSEDPEGLRVFYYLVQDLKC
LIFSLISLHFKIKPI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
acgggccactcaggcaagcatggacacgagttcctagagttcgagtattcccatggacgt
ttacgatacgccaacaactcgaactaccgtaatgacagtctgattcgtaaagagatgtgg
attgggccgttggtggtgaaagaactgaagagaatcgtcgagtcgagcgagatcatcaag
gaagacgaccagaactggccaaagaagaacatcgttgggaagcaggagttggaaatccga
gtggggaatgatcatattgcctttgaaacagcaaagatcggctcgttggtcgacgtacag
gacagcgaggacccagaaggcttacgcgtgttctactacctcgttcaggacctcaagtgt
ctcattttttctcttatttctctccacttcaaaatcaagcctatataa
DBGET
integrated database retrieval system
