Fomitiporia mediterranea: FOMMEDRAFT_95273
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Entry
FOMMEDRAFT_95273 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_95273
Enzymes [BR:
fme01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
FOMMEDRAFT_95273
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
FOMMEDRAFT_95273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
18680798
NCBI-ProteinID:
XP_007270725
JGI:
Fomme1_95273
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MAVFFTATTDNITPPVYAYSGNSPISTSWFRRVNTASADSSWLWGWAWGADNTVSVVDRS
PPVSFVSRPASFGRMIEDAVNGYGIPMNAFTMSCDEEENDKIPIWNLEPNLGCPKLCPSG
NHMPEPEESWIAIVQRGNCSFVAKVREAQRFGAKAVIVGGDDPAVTGNPDVLVNMYSQSD
SSDVKIPSTYIKFSDYSRLSNLIASSNTSTSGIKTVSLQITADYASWEWYSPILTFIVLL
LLPSALTLTTLLIHRIRAARAEQRERAPEDVVNRLPWRVWTGSGWEKHEGPVPSAKLSAD
TDLECGGDLDTILELAGQQGQCPPSTSRDDEGAETESVNPPWFDAQTECAICLNDFAKGD
RVRVLPCKHIFHLDEVDEWLIHRKKLCPVCKADVTQPSHPYHHLEPLPTEPVNSEPASPS
TSNERTPLLAQQRLLPLIGHPDTSPTRMSTSAPSHPLPPLHRDDERP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcttcttcaccgcaacgaccgataatatcacgcctcctgtctatgcttattcc
gggaacagccctatttcaacaagctggtttcgtcgagtcaacactgcaagtgccgacagc
agttggctctggggatgggcatggggtgcagataacacagtgtctgtcgtggatcgctcg
ccacctgtcagcttcgtttcccgacctgcctcgtttggtcgcatgatcgaagacgcggtt
aatggttacggtatccctatgaacgctttcaccatgagctgcgacgaagaagaaaacgat
aaaattccaatatggaaccttgaacccaacttgggctgccctaaactctgtccttctggg
aaccatatgccagagccagaggaaagttggatcgcaattgtgcagcgcggtaattgctcc
tttgtcgctaaggtacgagaggcacaacgatttggtgcaaaagccgtcattgtcggtggc
gacgacccagcggtcaccggtaatccagatgtacttgtgaatatgtacagtcaaagtgac
tcttcggatgtgaagataccctcgacttacattaaattctccgattattcgcgtctatca
aatctaattgcttcctccaacacatcaacgtccgggattaaaactgtgtccttacagata
accgcagactacgcctcttgggagtggtattcacctatcttaacattcattgtcttgctc
cttttaccttccgcattgaccctcactaccctgctcatccaccgcatccgggctgctcgt
gccgaacaacgggagcgcgcgccggaggacgtcgtcaaccgactgccctggcgggtgtgg
accggatcgggctgggagaaacacgaaggtccggttccctctgccaaattaagcgcagat
acggatttggaatgtggaggtgatttggacacaatactagaactggccggccaacagggg
caatgtccaccatctacatctcgggacgacgaaggcgcggaaactgagtctgtcaacccg
ccctggttcgatgcacagacggaatgtgcaatatgcctgaatgattttgctaagggagat
cgtgtacgcgttttaccttgcaagcatattttccacctcgacgaagtggatgagtggctc
attcatcgaaagaagctgtgtcctgtgtgcaaagcggacgtaactcaaccttcacaccca
tatcatcatctcgaaccccttcctactgagccggtaaactcagaacctgcatcgcctagc
acatcgaacgaacgaactcctcttcttgcacagcagcgtcttcttcccttaatcggccat
cccgacacgtcacctacgcgtatgtccacgtctgcaccttctcacccgcttccacctctc
catcgggatgacgagcgaccatga
DBGET
integrated database retrieval system