Fomitiporia mediterranea: FOMMEDRAFT_97041
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Entry
FOMMEDRAFT_97041 CDS
T03132
Name
(RefSeq) Rcd1-like protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
fme
Fomitiporia mediterranea
Pathway
fme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOMMEDRAFT_97041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_97041
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FOMMEDRAFT_97041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
18680912
NCBI-ProteinID:
XP_007271455
JGI:
Fomme1_97041
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MFGIPGTGLPQQQGQQQTFLQHQQQEESKIYALVIDLMDVNNREAALLELSKKREQYDDL
ALVLWHSFGIMSALLQEIVSVYPLLCPPNLTAHVSNRVCNALALLQCVASHSETRQLFLS
AHIPLFLYPFLNTTSKTRPFEYLRLTSLGVIGALVKQNDNAAVIHFLLSTEIIPLCLRIM
ETGSELSKTVAIFIVQKILLDETGLTYICHTYERFFAVVTVLSNMVSQLVETQAVRLLKH
VVRCYLRLSDNPKAREALRTCLPEPLRDQTFNALLKGDQVTKRCLSTLQNNLCDTN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaataccaggtacgggtctaccccagcagcagggacaacagcagacgttcctg
cagcaccagcagcaagaggaaagcaagatctatgcattggtgatcgacctcatggatgtt
aataaccgagaggcggcgctcctcgaattaagcaagaaaagagaacagtatgatgatctt
gcgcttgtcctttggcattcatttggcatcatgtccgctttgttgcaagagatcgtctct
gtttatccgcttctttgtccaccaaaccttactgcgcacgtctcgaaccgggtatgcaat
gcgctcgccctcctccaatgtgttgcctcgcactcggagacacgtcagcttttcctgagc
gctcacattccgctcttcctctatccgttcctgaacacgacctccaaaacgcgaccattt
gaatatctacgacttacatcactcggggtcattggcgcgctagttaagcagaatgacaac
gctgccgttatccacttcctactttctacggaaattatcccgctttgccttcgtattatg
gaaacaggcagcgagctttccaagaccgtcgcgattttcattgtacagaaaatccttctc
gacgaaactggattaacgtacatctgccacacttatgaacgtttcttcgccgtcgttacc
gtgttgagtaacatggtttcacaacttgttgagacccaggctgtccgtttactcaaacac
gtcgtgcgctgttacttgcgtcttagtgataatccgaaggctcgcgaggcgctgcgaact
tgtctcccagaaccattacgtgaccagacgttcaatgcactcctgaaaggtgaccaggtc
acgaaacgatgcctttctacgctgcagaacaatctatgtgacacaaactga
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