Fomitiporia mediterranea: FOMMEDRAFT_98121
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Entry
FOMMEDRAFT_98121 CDS
T03132
Name
(RefSeq) beta-hexosaminidase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00511
Other glycan degradation
fme00513
Various types of N-glycan biosynthesis
fme00520
Amino sugar and nucleotide sugar metabolism
fme00531
Glycosaminoglycan degradation
fme00600
Sphingolipid metabolism
fme00603
Glycosphingolipid biosynthesis - globo and isoglobo series
fme00604
Glycosphingolipid biosynthesis - ganglio series
fme01100
Metabolic pathways
fme04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
FOMMEDRAFT_98121
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
FOMMEDRAFT_98121
00513 Various types of N-glycan biosynthesis
FOMMEDRAFT_98121
00531 Glycosaminoglycan degradation
FOMMEDRAFT_98121
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
FOMMEDRAFT_98121
00604 Glycosphingolipid biosynthesis - ganglio series
FOMMEDRAFT_98121
00511 Other glycan degradation
FOMMEDRAFT_98121
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
FOMMEDRAFT_98121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fme03110
]
FOMMEDRAFT_98121
Enzymes [BR:
fme01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
FOMMEDRAFT_98121
Chaperones and folding catalysts [BR:
fme03110
]
Intramolecular chaperones
Others
FOMMEDRAFT_98121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
18680986
NCBI-ProteinID:
XP_007272010
JGI:
Fomme1_98121
UniProt:
R7SJN3
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MLLYSISCLFVLLLRAHDVHAIWPRPRSVTSGTQALRLSTNFSIVPNFQTTADIDSAISR
TQSLIQNDKLGRLVVGRGSSDASAVQSAQDLRSLELSLTNNSTGPVSNITTEAQKPLSER
DESYTLIIPSDGTTASLSANSSLGLLRGLTTFSQIWYDLNGEAYTLNTPISIEDSPAFPY
RGFMLDTARNFFPTSAIKRTLDAMSWVKINTFHWHITDSQSFPLQVPGFMELSAAGAYSN
ASTYSLSDIQDIVSYAGERGVDVLIEIDSPGHSAAIGESHPEHIACFHASPWSSFAAGQL
RIASPSTTNFSASLFSAVASMMPSSLLSTGGDEVNEPCYAEDTQTQAALNATGMTIEQAL
SNFTQATHGALRDAGKTPVVWEEMVLEHNVTLGNDTVVMVWISSQNAAAVAAKGFRLVHG
PSDYFYLDCGAGEWLGNDVTGNSWCDPFKTWQKAYSFDPYANLTSEQKSLVLGGQQLLWT
EQSAPQNLDSIVWPRAAASAEVFWTGGTLTDGGLNVTEALPRLHEMRFRMVQRGVNAIPL
QPEWCAIRPGECDG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtattccatctcctgtctttttgtcttgctattgcgagctcatgatgtgcat
gctatatggccgcgtcctcgttctgtgacgtctggcacccaggctttgcgcctttcgact
aacttttccatagtaccgaatttccagacgacagctgatatcgattctgctatctctcgt
acccagtctctcattcagaacgacaaactgggaagactggtggttggaagaggttcttcg
gacgcttcagctgtccagtctgctcaggatctcagatcgctggaactatcactgacaaac
aactctaccggtccagtatcgaacattacgacagaagcccaaaaaccactttcagaacga
gatgaaagctatactctaattattccctcagacggcaccacagcgagcctctcagcaaat
tcttcacttgggctgcttcgaggattgacgacgttcagtcaaatctggtacgatcttaac
ggagaggcgtacacgctaaacacgccgatatctatcgaagattccccagcatttccatat
cgaggttttatgctcgacaccgcgcgaaatttcttcccgacttctgctatcaaacggaca
ttagatgcaatgagctgggtcaagataaacaccttccattggcatattacggatagccaa
agcttcccgctccaggtcccaggattcatggaattatcggctgccggagcttactcaaat
gcatcgacttacagcctcagtgacattcaagatatcgtgagttacgcgggggagagaggc
gttgatgtccttattgaaatcgactcgccaggacattcggccgccatcggcgagtctcac
ccagaacacattgcatgcttccatgcgtcgccgtggtcatcttttgctgcaggccaatta
cgcattgcttccccgtccaccacgaatttttctgcttcgttattctctgccgttgcgtcc
atgatgccatcctccttgcttagtacgggtggtgatgaggtcaatgaaccctgctacgca
gaagacacgcagacccaggctgcactgaacgccactgggatgacgatcgagcaggcgctc
agcaacttcactcaggcgacgcatggggcattgagagatgcagggaagacaccagttgtt
tgggaagaaatggtgcttgagcataacgtcacgctaggaaacgacacagttgtcatggta
tggatatcttcgcaaaacgcagctgctgttgctgccaagggcttccgcctcgtgcacgga
ccatccgattacttctaccttgattgcggagcgggagagtggctaggaaacgacgtcaca
gggaatagttggtgtgatccctttaaaacctggcagaaagcctactcctttgatccctac
gcaaacctaacgtccgagcagaaaagcctcgttctaggtggtcagcaacttttgtggacc
gaacaatccgccccacaaaacctcgacagcatcgtctggccgcgcgccgcggcctccgct
gaagtcttttggacaggtggaaccctcacagatggcggactaaacgtcaccgaagccctt
ccacggctccacgaaatgcggttccgcatggtccagcgcggcgtcaacgctatccccctt
caacccgaatggtgtgcgattcgtccgggagaatgcgacgggtag
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