Flavobacterium magnum: HYN48_01840
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Entry
HYN48_01840 CDS
T06478
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fmg
Flavobacterium magnum
Pathway
fmg03030
DNA replication
fmg03430
Mismatch repair
fmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN48_01840
03430 Mismatch repair
HYN48_01840
03440 Homologous recombination
HYN48_01840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmg03032
]
HYN48_01840
03400 DNA repair and recombination proteins [BR:
fmg03400
]
HYN48_01840
Enzymes [BR:
fmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN48_01840
DNA replication proteins [BR:
fmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN48_01840
DNA repair and recombination proteins [BR:
fmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN48_01840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AWA28925
UniProt:
A0A2S0RBK0
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All DBs
Position
483232..484617
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AA seq
461 aa
AA seq
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MKTMQYAITDIETTGGNATGSRITEIAIIIHDGEKVIDRWETLVNPEKDIPLPIFALTGI
NNEMVRHAPVFDEVAGKVFELLSGRIFVAHNVNFDYSFVKHQLGQSGFTWSAKKLCTVRA
ARKIRPGLGSYSLGNLCRALDIAIENRHRAGGDADATATLFSQLLQWDSECEIGKMLRKA
SQEQRLPPNLPREDFDQLPEKPGVYYFYNEAKKVVYVGKAVNLKKRVASHFTGHKITPQR
QHFLRDIYSISFEVCATELMALLLECTEIRKLWPVYNKALKRFEAKFGLYDYEARNGYRY
LAVGKLRKHQSCIQTFYHEYEAVHTLLGLVDDFRIDQRFCIYGKPAEGELPVKHASTNLP
APEQHNLRVAAALNSLSQARPSFAIVDKGRHADERSCIWVENGMFYGMGYVDNTVGFTEP
SGVREYVTRYKGNQYVMQLIDGFVKKYPGKVLYENQSVERL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgatgcaatatgccattaccgacatcgaaactaccggcggcaatgccactggc
agccgtattacggaaattgcgatcatcatccacgacggtgagaaagtgattgaccgttgg
gaaacgttggtgaatccggaaaaggacattcccctgccgattttcgcgctgacgggcatc
aacaatgagatggtgcgccatgcgccggtttttgacgaggtggcggggaaggtttttgag
ctgctttcaggacgcatctttgtggcgcacaatgtcaatttcgattactctttcgtaaaa
caccaactcgggcagtcaggctttacctggagtgcaaaaaaactatgcacggtacgtgct
gcaaggaaaatcaggccgggtctgggttcgtacagcctggggaatctttgccgcgcactg
gacatcgccattgaaaaccggcaccgggcaggcggtgatgccgatgctacggcgaccttg
ttttcgcaattactgcaatgggactcagaatgcgaaatcggcaagatgcttcggaaagcg
tcacaggaacagcgcctgccgcccaacctgccccgggaggattttgaccaactgcccgaa
aagccaggcgtgtattatttttacaacgaagccaaaaaagtggtctatgtgggcaaggcg
gtgaatctcaaaaaacgcgttgcctcgcatttcaccggacataaaattacgccacagcgc
caacattttttacgcgatatttacagcatttcatttgaagtgtgcgctacggaactgatg
gccctgctgctcgaatgcaccgaaatccggaaactctggccggtatacaacaaagccctt
aagcgcttcgaggcaaaattcggcctgtacgactatgaggcccgaaacggctaccgctat
cttgccgtcgggaaattgcgcaagcaccagtcctgtatacaaacgttttatcatgagtat
gaagccgtacacacgctgctgggcctcgtggatgacttccgtatcgatcagcggttctgc
atttatggaaaacctgcggaaggcgaattgcccgttaagcatgcgtccacaaacctgcct
gcgccggaacaacacaacctgcgtgtggcggctgccctgaattcgctgtcacaggcgcgt
cccagttttgcgattgtcgataaaggccggcatgccgatgagcgcagctgcatctgggta
gagaatggcatgttttacggcatgggttacgtggacaacactgtcggatttaccgagcct
tcaggcgtacgtgaatatgtcacgcggtacaagggaaatcaatatgtgatgcagctgatt
gacgggtttgtgaagaagtaccccggtaaagtgctgtatgaaaaccaatcggttgaaagg
ttgtaa
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