Flavobacterium magnum: HYN48_01925
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Entry
HYN48_01925 CDS
T06478
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fmg
Flavobacterium magnum
Pathway
fmg03030
DNA replication
fmg03430
Mismatch repair
fmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN48_01925
03430 Mismatch repair
HYN48_01925
03440 Homologous recombination
HYN48_01925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmg03032
]
HYN48_01925
03400 DNA repair and recombination proteins [BR:
fmg03400
]
HYN48_01925
Enzymes [BR:
fmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN48_01925
DNA replication proteins [BR:
fmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN48_01925
DNA repair and recombination proteins [BR:
fmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN48_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AWA28939
UniProt:
A0A2S0RBK1
LinkDB
All DBs
Position
complement(496971..501473)
Genome browser
AA seq
1500 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTSNWPRCVQIAWQLHDDMGRLIDHQDYLIRPEGFNIPY
DAERIHGISTELAQQQGVPLAEVLEKFNTALSGAKFIVGQNIGFDVNIMGCEFHRFGVES
AMGGMPVLDTCTEVTASLLKLPGGRGGKFKLPTLTELHQYLFHVPFAEAHNATADVEATT
RCFLELIRREVFTKEELDVPAEYFRDYRNFNPGEIQLIGLKHINLKAASEAIRDSFRKSD
EAKRPDSGLAAAAIDTDFVHLHNHTQFSVLQSTISVASLVKAAIQHKMPAVAITDHANLM
GAFHFVRDILNHNKSAEAKNKAAVENGELPSEVLLKPIVGCEFFVCEDRRDKTRKDNGYQ
IVFLAKNKKGYHNLAKLSSIAYTEGFYYVPRIDRAAIEEYKEDLIVLSGNLYGEIPNKIL
NVGENQAEEALIWWKRQFGPDFYIELMRHNQENENRVNQSLIRLAQKHEVKLVATNNIFY
IDKADANAHDILLCVRDGEKQATPIGLGRGFRYGMPNQEYYFKSGDEMKALFHDLPEAIR
TISEIVDKIEIYSLAREVLLPKFVIPAEFLVPEDETDGGKRGENKYLRYLTYKGAERRYA
EITPEIRERIDFELLTIENSGYPGYFLIVQDFIAEARNMGVSVGPGRGSAAGAVVAYCLG
ITNIDPLKYNLLFERFLNPDRVSLPDIDIDFDDEGRSKVMDYVISKYGSKQVAQIITYGT
MAAKSAIRDTARVLDLPLFEADKIAKLIPFNLNLAKIFSMEESKLKSSLRPEDFEKVQEL
IALAKAGDMSGETLQQAQILEGNLRNTGIHACGVIITPDDITKFVPVATAKDSDLYVTQF
DNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKYRTGKDIDPDQFPIDDVKTYELFQRGET
VGIFQYESAGMQKYMKELKPTVFDDLIAMNALYRPGPIAYIPSFIKRKNGEEEIVYDLDA
CEELLKDTYGITVYQEQVMLLSQKLADFSKGDADVLRKAMGKKQRDVLDKMKPKFINQAV
ANGHPEEKLEKIWKDWEAFAEYAFNKSHSTCYAWIAYQTAYLKANYPAEYMAAVLSNNMS
DIKQVSFFMEECKRMGLEVLGPDVNESFYKFTVNEHYAVRFGIGAVKGVGMGAVQTIVEN
RKSGKYKSIFDLAKRVDLRAANKKAFENLALAGGFDSFTGTHRAQYFHDEGDGITFLEKA
VRYGAKFQENENSSQVSLFGEASDVQIPEPIVPPCEDWNTMEKLAKEKEVVGIYISGHPL
DDYKFEMKYFCSHKLESLKNLEAHVNKTLSLGGIITNVQHRTAKNGKGWASFVLEGYDES
YEFRIFGEEYLKFRHFLIQNNFTFIKVMVREGWADKETGKKGEPRLQFMLVQYLQDVLAA
FAKKLIINLNIEELKPDTVHQLSHVFLQNKGDHAVTFEVEETEKVKKIVAATEVELDENS
ISESSSDSIEGEEMELSVATEIEETKIITRLTMPSRKLKVRISNELLQELEKMQLHFKLN
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaattttcgataccgaaaccaccggattgcccaagcgttgggacgcacccata
accgatacgtcgaactggccacgctgcgtgcagatcgcctggcagctccatgatgatatg
ggccgtcttatcgaccatcaggattacctgatccggcccgaaggctttaacatcccttac
gatgccgagcgtattcatggcatttcaacggagctcgcccagcaacagggtgtacccctt
gccgaagtgctggaaaaattcaatacggcattgtccggagcgaaattcatcgtcggccag
aatattggcttcgatgtgaatatcatgggctgtgagttccatcgtttcggagtcgaatcg
gccatgggcggaatgccggtgctcgatacctgtacggaagtcactgcgtcattgctcaag
cttcccggtggccgtggcggaaagtttaaattgcccacactcacggagctgcatcagtac
ctgtttcatgtgccgtttgccgaggcgcacaatgccacagccgacgtcgaagccaccacg
cgttgcttccttgaactgatccgccgcgaggtttttacaaaagaagaacttgacgtcccg
gcagaatatttccgggattatcgcaatttcaacccgggtgaaatccagctcatcggactc
aaacacatcaatctcaaggccgcctctgaggccatccgcgacagtttccgcaaaagcgat
gaagcaaaacgtccagattcgggccttgccgctgcagctattgataccgattttgtccac
ctgcacaaccatacccagttttcggtactgcaatccacaatcagcgtggcctcgctggtg
aaagctgcaatccagcataaaatgcctgccgtagccattacggaccatgccaacctgatg
ggcgcttttcatttcgtccgcgatatcctgaaccataataaatccgctgaagccaaaaac
aaagcggctgtggaaaacggcgaactcccttcggaagtccttttgaaaccgattgtcggt
tgtgagttttttgtatgcgaagaccgcagggacaagacacggaaggacaacgggtaccag
attgtcttcctggcgaaaaacaagaaagggtaccacaacctcgctaaactgtcatcgata
gcctataccgagggtttttattacgtgccacggatcgacagggctgccatcgaagaatac
aaagaggacctgattgtgttgtcaggcaatttatacggcgaaataccgaacaagatccta
aacgttggtgaaaatcaggccgaggaagcgctcatttggtggaagcggcaattcggtccc
gatttctacatcgaactgatgcgccacaaccaggaaaatgaaaaccgcgtcaaccaatcg
ctgatccggctcgcgcaaaagcatgaggtgaaacttgtcgcgaccaataacatcttttac
attgataaggccgatgccaacgcccacgacattttgctgtgcgtgcgagacggcgaaaag
caggccacaccaatcggactgggccgcggcttccgttacggcatgcccaaccaggaatac
tacttcaagtcgggcgacgaaatgaaagcgctgttccatgatttgccggaagccatccgc
accatctccgaaattgtcgataagatcgaaatttacagcctcgcgcgtgaggtgctgttg
ccgaaattcgtcattcctgccgaatttttggtgcccgaagatgaaactgatggaggaaaa
cgcggcgaaaacaagtacctgcgctaccttacttataaaggagcggaaaggcggtatgcc
gaaattacacctgaaatcagggaacgcatcgactttgaattgctcaccattgagaattcc
ggttatcccggctactttctgattgtgcaggattttattgcggaagcgaggaatatgggc
gtatcggtcggccccggacgggggtcggcagccggcgctgtagtggcgtattgtcttggg
attaccaacatcgacccgttgaaatacaacctgctttttgagcgcttcctgaatcccgac
cgcgtctcgctccctgatatcgatatcgattttgatgacgaaggccgcagcaaggtcatg
gattacgtgatcagcaaatacggatccaagcaggtggcgcagattattacctacggcacg
atggccgccaaatcagcgatccgtgataccgcgcgcgtactcgaccttccgctttttgaa
gccgataaaatcgccaagctgattcctttcaacctcaatctggccaagatattttcgatg
gaggaatcaaagctcaaatcatcgctgcgtcctgaggattttgaaaaagtacaggagctt
attgcactggcgaaggccggggacatgagcggcgagacgctgcagcaggcgcagatcctt
gaggggaatttacgcaacaccgggattcacgcgtgtggcgtgatcatcacccccgacgat
atcacgaaattcgtgccggtcgctacggcgaaagattcggatctttatgtcacgcaattc
gataactcggtcgtggaaagtgcgggtttgctgaagatggacttcctcggactgaaaacc
cttacactgataaaggataccgtaaagcttgtaaaataccgtacgggcaaggatatcgat
ccggaccagtttccgattgatgacgtcaagacctatgaattgttccaacgtggcgaaacg
gtggggatattccagtatgaaagtgcagggatgcagaaatacatgaaggaactcaagccc
acggtttttgacgacctaatcgcgatgaatgccttgtatcgtcccggcccgatcgcttac
atcccaagctttatcaagcgaaagaatggagaagaggaaatcgtatacgacctcgatgcg
tgcgaggaattgctcaaggatacttatgggattacggtataccaggaacaggtgatgctg
ctctcgcaaaagctggcggatttctctaaaggcgatgccgacgtcctgcgtaaagcgatg
ggaaaaaagcaacgcgatgtactcgataagatgaaacccaaattcatcaatcaggcagtg
gctaacggtcatcccgaagaaaaacttgaaaaaatctggaaagactgggaggcatttgca
gaatatgcattcaacaaatcccactctacctgctacgcctggattgcataccaaacggca
tatctcaaggcaaactacccggcggagtatatggcagcggtgctttcgaacaacatgagc
gacatcaagcaggtgtcttttttcatggaagaatgcaagcgtatgggactcgaggtgctt
gggcccgatgtcaatgaatcgttctacaagtttacggtaaatgagcattacgccgtccgt
tttggaataggggcagtgaaaggcgtagggatgggtgcagtacagaccatcgtcgaaaac
cgaaaatcgggcaagtacaaatcgatcttcgatctggccaaacgggtcgatttgcgcgca
gccaacaagaaagcattcgagaacctggcgctggcgggcggtttcgattcctttaccggg
acacaccgggcacagtattttcatgatgagggtgacgggattacgttccttgaaaaagcg
gtacgctatggagcgaaattccaggaaaatgaaaattcgtcgcaggtaagcctcttcggg
gaagccagcgatgtgcagatccctgaacccattgtaccgccctgcgaagattggaatacc
atggagaagcttgcaaaagaaaaggaagtggtcgggatttacatttcagggcatccattg
gatgattacaaattcgaaatgaagtatttctgcagccataagctggaatcgctgaaaaac
ctcgaagcacacgtcaacaagaccttaagtctcgggggcatcattacaaatgtgcagcac
cgaacagcgaaaaacggcaaaggctgggcatcatttgtgctcgaaggttacgatgagagt
tacgaatttcgcattttcggtgaagaatacctgaagttccgacatttcctgatccagaac
aactttacatttatcaaggtcatggttcgtgaaggctgggcagataaggaaaccggaaag
aaaggcgagccgcgtttacagtttatgcttgtacagtacctccaggatgtgctggccgcg
ttcgcaaaaaaactcatcatcaacctcaatatcgaagagcttaagccggataccgttcat
cagctgagtcatgttttcctgcagaacaaaggcgatcatgccgtgacttttgaagtggag
gaaaccgaaaaagtcaagaaaattgtagcagccacagaagtcgaactggacgagaacagc
atttcggaaagcagctcagacagcattgaaggcgaagaaatggaactcagcgtagccacg
gagatcgaggaaaccaaaatcatcaccaggctaacgatgccaagccgcaaactcaaggtc
cggatctcaaacgagttgttgcaggaacttgagaaaatgcagttgcatttcaaactcaat
taa
DBGET
integrated database retrieval system
