KEGG   Flavobacterium magnum: HYN48_05080
Entry
HYN48_05080       CDS       T06478                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
fmg  Flavobacterium magnum
Pathway
fmg03030  DNA replication
fmg03410  Base excision repair
fmg03420  Nucleotide excision repair
fmg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HYN48_05080
   03410 Base excision repair
    HYN48_05080
   03420 Nucleotide excision repair
    HYN48_05080
   03440 Homologous recombination
    HYN48_05080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fmg03032]
    HYN48_05080
   03400 DNA repair and recombination proteins [BR:fmg03400]
    HYN48_05080
Enzymes [BR:fmg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HYN48_05080
DNA replication proteins [BR:fmg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HYN48_05080
DNA repair and recombination proteins [BR:fmg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HYN48_05080
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HYN48_05080
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2
Other DBs
NCBI-ProteinID: AWA29511
UniProt: A0A2S0REH9
LinkDB
Position
complement(1229008..1231839)
AA seq 943 aa
MSQKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAILGFMNSLLDVIKREKPDHLAVA
FDKEGSQVRTEMYSAYKANRDETPEAIRIAIPYIQDLLRAMHIPILELAGCEADDLIGTI
AKQAANQNYQVFMVTPDKDFAQLVSENIFMYKPARLGNGIEIWGIPEVLDRFEIERPEQV
IDFLGMMGDAVDNIPGLPGVGEVTAKKFLKEFGSMENLLENTDKLKGKMKENIEANKALG
LLSKQLATILCDCDVTFNEDDYELSKPDAEKVGEIFRELEFRRLSEQFNSLFFSGQKNYA
SIETQGLPPTKTIVKTDQFDLFSIQEQADEASGQINSFYKTLENTDHHYQLAETEMAVKF
LIQNLLRQTAVSFDTETTGIDALNAELVGLSFSWEKGKGFYVPVPENREAAQALVDKFAP
FWESETIEKIGQNLKYDLKVLSNYGVTVKGKLFDTMIAHYLINPDMRHNMDVLSETYLQY
TPKPIEDLIGKKGKNQKSMRDVAVEDVKEYAAEDADVTLQLKEHFAPILDQTGTRKLFDE
LEIPLVPVLAAMETEGVRLDTGFLKAMSAEMDHDIKVFENRIYETAGEKFNLASPKQLGE
ILFDKMKIGEGKQKKTKTGQYATGEEVLSYLALSSPFVQDILDWRQLVKLQSTYVTALPT
QVCSKTGRVHTDYMQAVAATGRLSSNNPNLQNIPIRTERGRQIRKAFVPRDENHTLVSAD
YSQIELRIIAALSGEENMIRSFRNGEDIHAATAAKVFNVLLDDVTREQRSHAKTVNFGII
YGVSAFGLSNQTSLTRSESKDLIDAYYQTYPRLRSYIGEQIDTAREQGFVQTILGRRRYL
KDINSANAVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLTSENWKSKMLLQVHDELV
FDVHNSELEKIQPMIKYEMENAYKLDVPLEVDLGMGQNWLEAH
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgtcacaaaaacgccttttcctgctcgatgcgtacgcgctgattttccgcggctactat
gcgctgatcaaaaatccccgaatcaattcaaagggaatggatacctcagccatactcgga
tttatgaattccctgctcgatgtcatcaaacgggaaaaaccggaccatcttgccgttgca
tttgacaaggaaggcagccaggtgcgtaccgaaatgtattccgcatataaggccaatcgc
gacgaaacccctgaagccatccgcatcgccatcccgtatatccaggacctgctgcgcgcc
atgcacatcccaatccttgagcttgcgggatgcgaagccgacgacctgatcggcaccatt
gcgaagcaggccgcaaaccagaactaccaggtttttatggtaacgcccgataaggatttt
gcccagttggtctctgagaatatttttatgtataaacccgcacgtctgggcaacggcatt
gaaatctggggcattcccgaagtgctcgaccgatttgagattgagcgcccggaacaggta
atcgattttcttgggatgatgggagatgccgtcgacaacatcccgggacttcccggcgtg
ggcgaagtcaccgcgaaaaagttccttaaggaatttgggtcaatggaaaacttactcgaa
aacaccgacaagctcaaaggcaagatgaaggaaaatatcgaagccaataaagcactcgga
ctattatcgaagcaactcgccaccattttatgcgattgcgacgtgaccttcaatgaggac
gactatgaactgtcaaagccggatgcggaaaaggtgggggaaatcttccgcgaactcgaa
ttccgaaggctgtcagaacagttcaacagcctgttcttttcgggccagaaaaattatgcc
agtattgagacgcagggactgccgccaaccaaaacgattgtaaaaaccgaccagttcgac
ctgttttcgatccaggagcaggctgacgaggcttcaggccagatcaacagtttctataag
acactggaaaataccgaccaccattaccaattggcggaaaccgaaatggccgtaaaattc
ctgatccagaatttactcaggcagactgcagtaagcttcgacactgaaaccaccggtatc
gacgcgctgaacgctgagctcgtgggtttgtctttctcgtgggaaaaagggaagggattt
tatgtgcccgtccctgaaaaccgggaagcagcgcaggcgttggtcgataaattcgcgcct
ttctgggaatcggagaccattgaaaaaatcgggcagaacctgaagtacgacttgaaagtg
ctgtccaattacggcgtgaccgttaagggaaaattatttgacacgatgattgcgcattac
ctgatcaatccggacatgcgccacaatatggatgtattgtctgaaacatacctgcaatac
accccaaagccaattgaggacctgattgggaaaaaaggcaaaaaccaaaagtcgatgcgt
gatgtcgctgtagaagatgtcaaggagtacgccgccgaggatgccgatgtgactttacaa
ttgaaggaacattttgcgccaatcctggaccaaaccggcacccgcaaacttttcgacgag
ctcgaaatcccactcgtccctgtgctggctgcgatggaaaccgaaggcgtgcgcctcgac
accggattcctgaaagccatgtccgcagaaatggatcatgatattaaggttttcgaaaac
cgtatttatgaaaccgccggtgaaaaattcaacctggcttccccgaaacagctcggcgaa
attctgtttgacaaaatgaaaatcggtgaaggcaaacagaaaaagacgaagaccgggcaa
tatgctacgggagaagaggtcctgtcctacctggctttgtccagtccgttcgtacaggat
atcctcgactggcggcaactcgtaaaactgcaaagcacttacgtaacggcattaccgacc
caggtgtgcagtaaaaccggccgtgtccataccgattatatgcaggccgtcgcagccacc
ggacggctgagttccaacaaccccaacctgcagaatatccctatacggacagaacgcggt
cggcagatccgtaaggcttttgtaccacgagatgaaaaccacacgttggtttccgcggat
tactcgcaaattgaattgcgcatcattgccgcactcagcggggaggaaaatatgatacgg
tcattccggaacggggaggacatccatgccgctacagcagcaaaggtgttcaatgtgctg
ctggatgacgtgacgcgcgagcagcgaagccatgccaagaccgtgaatttcgggatcatc
tatggcgtctccgcgttcgggctcagcaaccagacgtcgctgacacgcagcgaatccaaa
gaccttattgacgcgtattatcaaacgtacccaagactgcggagctacatcggtgagcag
atcgacacggcgcgcgaacagggattcgtgcagaccatcctgggccgccgccgctacctt
aaagacatcaactcggccaacgcggtggttcgcggtgccgcggaaaggaacgccgtcaat
gcgccaatccagggcagcgcagccgacattatcaagattgccatgatcaacatccataaa
aaactgacgtcagaaaactggaaaagcaaaatgctgctgcaggtacatgatgaattggta
ttcgacgtacacaattcggaactcgaaaaaatccagccgatgatcaaatatgaaatggaa
aacgcctacaaactcgatgtgcctttagaagtagatctgggaatgggtcagaactggcta
gaagcgcattaa

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