Flavobacterium magnum: HYN48_05135
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Entry
HYN48_05135 CDS
T06478
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fmg
Flavobacterium magnum
Brite
KEGG Orthology (KO) [BR:
fmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmg03021
]
HYN48_05135
03009 Ribosome biogenesis [BR:
fmg03009
]
HYN48_05135
Transcription machinery [BR:
fmg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HYN48_05135
Ribosome biogenesis [BR:
fmg03009
]
Prokaryotic type
rRNA transcription factors
HYN48_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AWA29520
UniProt:
A0A2S0RDZ9
LinkDB
All DBs
Position
1241970..1243214
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AA seq
414 aa
AA seq
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MENLALIDSFSEFKDDKLIDRVTLMAILEDVFRNALKKKFGSDDNFDIIINPDKGDMEIW
RRRVIVADDDLDLENEEITLTEARKIEPDFEIGEEVSEEVKLIDLGRRAILALRQNLISK
IHEHDNTNLYKQFKDLIGEIYTAEVHHVRPRVVILVDDEGNEIVLPKEKQIPSDFFRKGD
NVRGIIENVELKGNKPQIIMSRTSEKFLEKLFEQEIPEVFDGLIMVKNVVRIPGEKAKVA
VDSYDDRIDPVGACVGMKGSRIHGIVRELGNENIDVINYTTNQQLYITRALSPAKVSSIK
INEEHKRAEVFLKLEEVSKAIGRGGHNIKLAGLLTGYELDVIREGNIADEEDDVELTEFS
DEIEAWVIEEFSKIGLDTARSILKQDVNDLVRRTDLEEETILDVMRILKEEFNN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttagcattaatcgattcattttcagagtttaaagatgataagctcattgat
cgtgtaacgcttatggcgattttggaagatgtgttccgcaatgcattgaaaaagaaattc
ggatctgacgataattttgatatcatcatcaacccggacaaaggggatatggaaatctgg
agaagaagggtcattgttgctgatgacgacctggatctggagaatgaggaaatcacattg
accgaagccagaaaaatcgagcctgactttgaaatcggagaggaagtttccgaggaagta
aaattgatcgatttgggaagaagggccatcctggcattgcgtcagaacctgatttccaaa
atccacgaacacgacaataccaatctttataagcagtttaaggacctgatcggtgaaatt
tatacggctgaagtgcaccatgttcgcccaagagtcgtaattttggttgatgatgaaggc
aacgagatcgtgttgccaaaggaaaagcagattccgtccgactttttccgtaagggcgat
aacgtccgtggaatcattgaaaacgtggagctcaaaggcaataagccgcaaatcatcatg
tcacgtacttcagagaaattcctcgagaaattattcgagcaggaaattccggaagttttc
gacggactgattatggtgaagaatgttgtgcgtattcctggcgagaaagcgaaagtagct
gtagattcgtatgacgacaggatcgatcctgtaggtgcttgcgtcgggatgaaaggatcg
aggatccatggtatcgtgcgtgaattgggtaatgagaacatcgacgtgatcaattacacg
acaaaccagcaattgtacatcacaagagcgttaagccctgccaaagtgtcctcaatcaag
atcaatgaagagcacaaaagggcggaagtgttcctgaaactggaagaagtgtccaaggcc
atcggtcgcgggggtcacaatatcaaactggcaggattattgacagggtatgaactggat
gtcatccgtgaaggaaatattgcagatgaagaagatgacgtagaattgactgagttctct
gatgaaatcgaggcctgggtgatcgaggaattttcaaaaatcggactcgataccgcaaga
agcatccttaagcaggacgtaaatgaccttgtcaggagaactgatcttgaggaagaaacc
atcttggacgtgatgcgtatcctcaaagaagaattcaacaactaa
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