Flavobacterium magnum: HYN48_05205
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Entry
HYN48_05205 CDS
T06478
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fmg
Flavobacterium magnum
Pathway
fmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYN48_05205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmg03400
]
HYN48_05205
Enzymes [BR:
fmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN48_05205
DNA repair and recombination proteins [BR:
fmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYN48_05205
RecFOR pathway proteins
HYN48_05205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
Mg_chelatase
AAA_3
Rad17
nSTAND3
AAA_14
AAA_16
RNA_helicase
NB-ARC
TsaE
TIP49
AAA_28
AAA_33
AAA_18
AAA_PrkA
Torsin
AAA_17
AAA_24
ABC_tran
RsgA_GTPase
Sigma54_activ_2
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWA29532
UniProt:
A0A2S0RFP2
LinkDB
All DBs
Position
1258943..1259965
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLNPTNKHFNNDELDLEKKLRPLAFDDFAGQDQVLDNLKVFVEAANLRSEALDHTLF
HGPPGLGKTTLANILANELGVAIKITSGPVLDKPGDLAGLLTNLEERDVLFIDEIHRLSP
IVEEYLYSAMEDFKIDIMIESGPNARSVQIGLNPFTLVGATTRSGLLTAPMRARFGIQSR
LQYYTTELLTTIVQRSSAILKMPITMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
KIDIEIARYSLKALHVDAHGLDEMDNKILNTIIDKFKGGPVGLSTLATAVSESSETIEEV
YEPFLIQEGFIMRTPRGREVTEKAYKHLGKVKTGIQGGLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaacctgaatccgaccaataagcacttcaataacgacgagctcgatcttgaa
aagaagttgcgcccactggcctttgacgatttcgccggccaggatcaggtgctcgacaat
ctcaaggtttttgtggaagcggccaacctgcgttccgaagccctcgaccatacgttattc
cacggcccgcccggattgggaaaaaccactttggcaaacatcctggccaacgaattgggg
gtcgcgattaagattacttcggggccggtgctggacaaacccggtgatctggccggtttg
ctgaccaaccttgaagaacgtgatgtgctgttcatagacgagatacaccgcctgagcccg
atagtcgaagaatacctgtactcggccatggaagatttcaagatcgatatcatgatcgaa
tccggcccgaatgccagaagcgtacaaatcgggctgaatccatttacactcgtcggtgcg
acgacacgttccggtttgttgactgcgccgatgcgtgcgcgtttcgggatccaaagccgc
ctgcagtactacaccacagaattacttacgactattgtccagcgcagctcggcgattctc
aaaatgccgataacaatggaagccgccatcgagattgcgggacgaagccgcggtacgcca
cgtatcgccaatgcgttgctgcgtcgcgtccgtgattttgcccagatcaaaggcaacggg
aaaatagacattgagatcgcgcgctattcgcttaaggccttacacgtcgatgcgcacggc
ctcgatgaaatggacaataagatcctcaataccatcattgacaagttcaagggcgggccg
gtcggcctttcgacactcgccacagcagtttccgaaagcagtgagaccatcgaagaggtc
tatgagccattcctgatccaggaaggttttatcatgcgcacaccccgcgggcgcgaagtg
accgagaaggcttataaacatttggggaaggtaaaaaccggcatacagggcggtttgttt
tag
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