Flavobacterium magnum: HYN48_09410
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Entry
HYN48_09410 CDS
T06478
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fmg
Flavobacterium magnum
Pathway
fmg03420
Nucleotide excision repair
fmg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN48_09410
03430 Mismatch repair
HYN48_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmg03400
]
HYN48_09410
Enzymes [BR:
fmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN48_09410
DNA repair and recombination proteins [BR:
fmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN48_09410
MMR (mismatch excision repair)
Other MMR factors
HYN48_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
nSTAND3
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWA30283
UniProt:
A0A2S0REU1
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All DBs
Position
2247037..2249361
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AA seq
774 aa
AA seq
DB search
MQHHISQLNEAQQQPVLHKDGPMIIIAGAGSGKTRVLTIRIAYLMSQGVDAFNILALTFT
NKAAREMKKRISDIVGSTEAKNLWMGTFHSVFARILRAEADKLGYPSNFTIYDTQDSVRL
ISAIIKEMQLDKDIYKPKQVFGRISSYKNSLITVKAYFNDPELQEADAMSKKPRMGEIYQ
NYVDRCFKAGAMDFDDLLLKTNELLNRFPDVLLKYQHRFKYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVKTYRLEQNYRSSKNIVEAANS
IIDKNKVKLDKIVWTANDDGPPIKVHRSMTDGEEGRFVASTIFETKMQKQLMNNQFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVLNPKDEEALIRVINYP
ARGIGDTTIEKLTIAANHYKRSIFEVMQHIDKIDLKLNSGTKNKLQDFVTMIRSFQVLNE
THDAFFMADHVTKKTGLVQELKKDATPEGIARIENIEELLNGMKDFIEGQKEIDGARGSL
SEFMEDVALATDLDNDPGDDDRVALMTIHLAKGLEFPYVFIVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLSDSEPSRFIDEIDGQYLEYLTPEESNY
RYRPMIDIDIFGDVDKSKLRQSKPVASAPPKYITDNQPKPDSPIRRLKPVGNQKPGTAND
LDLSVGNTVMHERFGKGEVVSMEGAGADRKAEICFDVGGIKKLLLRFAKLDVIG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaccatatcagccagttaaacgaagcccagcaacaaccagttttacataaagac
ggccccatgatcattatcgcgggcgccggatcgggcaagacccgcgtactgaccatccgc
atcgcttacctgatgagccagggcgttgatgctttcaatatcctggcgcttacttttacc
aataaggcggcgcgggaaatgaagaagcggatttcagatatcgtcggctcgaccgaagcc
aaaaacctgtggatgggtacttttcactcggtatttgccaggatactgcgcgctgaggct
gacaagctgggctacccgtcaaactttacgatttacgacacgcaggattcggtacggctc
atttctgccattattaaggaaatgcagctggacaaggacatttacaaaccaaagcaggtt
ttcggaaggatttcgtcctataaaaacagccttattaccgtaaaggcatattttaatgat
cccgagttacaggaggctgatgcgatgtcaaaaaagccacgcatgggggaaatttatcaa
aattatgtagaccgctgctttaaggcgggcgccatggattttgacgatttgttgcttaag
accaacgaactcctgaatcggtttccggatgtgctgcttaaataccagcatcgttttaaa
tacatccttgttgacgagtaccaggatacaaatcactcgcaatacctcattgtgcgcgcg
ctttctgaccgtttccagaatatttgtgtggtgggagacgatgcgcagagtatttacgct
ttccgcggcgcgaacatcaacaacatcctgaatttccagaaggattatgaaggcgtgaag
acctatcgcctcgaacagaattatcgttcctcgaagaatattgtcgaggccgcaaactcc
atcatcgacaagaataaggtcaagctcgacaagattgtctggaccgcaaatgatgatggg
cctccaatcaaggtccaccgcagcatgactgacggtgaagaagggcgtttcgtagccagt
accatcttcgaaaccaagatgcagaagcagttgatgaacaaccagtttgccatactgtac
cgcaccaatgcccagtcgcgcgcgatggaagacgcgttgcgcaagcgtgacattccctac
cggatttacggcgggttgtcattttatcaaagaaaagaaatcaaggatgtcctttgttac
ctccgcctggttttgaatccaaaggatgaggaagcactgatacgcgtcattaattatccg
gcacgtggcatcggcgatacgactatcgagaagctgaccattgcggcaaaccactacaag
cgatcgattttcgaggtaatgcagcacatcgacaaaatagacctcaagctgaattcgggt
accaaaaacaagctccaggacttcgtcacgatgatccgcagctttcaggtgctgaatgaa
acacatgatgcgttttttatggccgaccatgtgaccaaaaaaacggggcttgtgcaggaa
ttgaaaaaggatgcgacgccggaaggcattgcgcggattgaaaatattgaggaattgctc
aacggtatgaaggatttcatcgaggggcagaaggaaattgacggcgcccgcggctccctg
tccgaattcatggaggatgtcgccctcgctaccgacctggataacgatccgggcgatgac
gaccgcgtggccctgatgaccatccacctcgccaaaggacttgaatttccgtacgtgttc
attgtaggaatggaagaggatttatttccgagcgcgatgagcatgagcacccgaagcgaa
ctcgaggaagaacgccgcctgttttacgtagccctgacgcgcgcggaacaccaggcctac
ctgacctacgcgcagtcgcgttaccgttggggcaaactgagcgacagtgagccttcacgc
ttcatcgatgagattgacgggcagtacctcgagtaccttacgcccgaagaaagcaattac
cgctaccgccctatgattgacattgatattttcggcgatgttgataagtcgaaactcagg
cagagtaaacccgtggcatccgcgcccccaaagtacattaccgacaatcagccgaagcct
gacagtccgatacgcaggctgaaacccgtcgggaaccagaagccgggcactgcaaacgac
ctggacctgtccgtcgggaataccgtcatgcacgaacgcttcggaaaaggcgaggtcgtc
agtatggaaggtgcgggtgcggatagaaaagccgaaatctgttttgatgtgggtggaatt
aagaagttgttgttacgcttcgcgaaactcgatgtgatcgggtaa
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