Flavobacterium magnum: HYN48_12815
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Entry
HYN48_12815 CDS
T06478
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fmg
Flavobacterium magnum
Brite
KEGG Orthology (KO) [BR:
fmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmg03032
]
HYN48_12815
03400 DNA repair and recombination proteins [BR:
fmg03400
]
HYN48_12815
Enzymes [BR:
fmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYN48_12815
DNA replication proteins [BR:
fmg03032
]
Prokaryotic type
DNA Topoisomerases
HYN48_12815
DNA repair and recombination proteins [BR:
fmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN48_12815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4982
Motif
Other DBs
NCBI-ProteinID:
AWA30888
UniProt:
A0A2S0RI44
LinkDB
All DBs
Position
3022227..3023297
Genome browser
AA seq
356 aa
AA seq
DB search
MNRLQSKLEKIGRDPKVTARAVGLRYAANLEKGYHRVKSGDGFHYLDENRRKVRNKAVLE
RFKKLVIPPAWENVWISPYENGHLQVTGIDAKGRKQYRYHAHWNKIRNQSKFHRLQQFAT
ALPLIREQVDKDLDRKGLPYEKVVALVVRLIELTNIRIGNDAYKKLYGSFGLTTLQDKHV
TFDKSNLYFQFVGKKGVKHNIGIRSMKLLNLVKKCRDIPGQDLFQYYDDDGRHHVIGSAD
INNYLKNITQQDFTAKDFRVWAGSVNALCAFQSAGEPKNDSDCKHKIVEVIDSVAKKLGN
TRSVCRKYYVHPTVIAAYEKGSIWKYKPVETSPALNEEERTLISLLENETIAEVIA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggctgcaatccaaattagagaaaataggccgtgacccaaaagtgactgcccgg
gcggtaggacttcggtatgcggccaatctcgaaaaaggctaccaccgagtcaaatcaggc
gacggctttcactaccttgatgaaaaccgacgtaaagtcaggaacaaagccgtactggaa
cgattcaagaaactggtgattccccctgcctgggagaatgtatggatttccccttatgaa
aacggacatttgcaggtgactgggatcgatgccaagggccgcaagcaatatcgataccat
gcccattggaacaaaatcaggaaccagtcaaagtttcatcgcctgcagcagtttgccaca
gcgctgccgctgatccgtgagcaggtcgataaggatctggacaggaaggggcttccgtat
gagaaagtggtggctttggtggtacgactcattgagcttaccaacatcaggattggcaat
gacgcctataaaaaactctacggttcgttcgggcttaccacgcttcaggataaacacgtt
accttcgataagtcaaacctgtattttcaatttgtcggaaagaagggcgtgaagcacaac
atcgggatccggagcatgaaactgctcaatcttgtcaaaaaatgcagggacattccggga
caggatttgttccagtactatgatgacgacggcaggcaccatgtgatcggttcagccgac
atcaacaattaccttaaaaatatcacacaacaggattttaccgcaaaagatttccgggta
tgggcgggaagcgtcaatgcgttgtgcgcgttccaatcggcgggtgaaccgaaaaatgat
tccgattgcaagcataagatcgtcgaagtgattgactcagtggccaaaaaactgggcaat
acgagatccgtctgccggaaatattacgtccaccccacggttattgcagcgtatgagaaa
ggttctatctggaaatataaaccggttgagacttctcccgcgttaaacgaagaagaacgc
acgctgatcagccttctcgaaaatgaaaccatagcagaagttattgcgtag
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