KEGG   Flavobacterium magnum: HYN48_12825
Entry
HYN48_12825       CDS       T06478                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
fmg  Flavobacterium magnum
Pathway
fmg03030  DNA replication
fmg03430  Mismatch repair
fmg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HYN48_12825 (dnaX)
   03430 Mismatch repair
    HYN48_12825 (dnaX)
   03440 Homologous recombination
    HYN48_12825 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fmg03032]
    HYN48_12825 (dnaX)
   03400 DNA repair and recombination proteins [BR:fmg03400]
    HYN48_12825 (dnaX)
Enzymes [BR:fmg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HYN48_12825 (dnaX)
DNA replication proteins [BR:fmg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HYN48_12825 (dnaX)
DNA repair and recombination proteins [BR:fmg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HYN48_12825 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 RuvB_N AAA_14 AAA_5 Rad17 AAA_30 ResIII AAA_16 RCF1-5-like_lid nSTAND3 NTPase_1 DNA_pol3_delta_C AAA_24 DNA_pol3_gamma3 DEAD AAA_assoc_2 AAA_19 AAA_7 AAA_18 RNA_helicase NPHP3_N NACHT DUF815 Mg_chelatase AAA_28 GNAT_acetyltr_2 Sigma54_activ_2 dNK TsaE AAA_2
Other DBs
NCBI-ProteinID: AWA30890
UniProt: A0A2S0RI04
LinkDB
Position
3024025..3025110
AA seq 361 aa
MEQFVVSARKYRPQTFRDVVGQQAITNTLLNAIETNHLASALLFTGPRGVGKTTCARILA
RKINQPGYDDPNEDFAFNVFELDAASNNSVDDIRSLIDQVRIPPQTGQFKVYIIDEVHML
SSAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
KSQGVSYEDDALHIIAQKADGAMRDALSIFDRVVSYCGNNLTRQAVTENLNVLDYETYIN
VTELIIGNQIPELLVAYNDILSKGFDGHHFISGLASHFRDLLVCKNPATLSLLEAGEQAQ
KMYGAQAAKSPQDFLLKAIEVANDCDLKYKVSQNQRLLVELCLMQLASITFDGEKKKLTD
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttgtagtatcggcaaggaagtaccgcccccagaccttcagggatgtggtc
gggcagcaggccattacaaatacgttgttgaatgccattgagaccaaccatcttgcgtcg
gcgttattgtttaccgggccaaggggcgtcggaaaaaccacctgcgccaggatcctggcc
agaaaaatcaaccagcccggctatgatgaccctaatgaggatttcgcattcaatgtattt
gagcttgatgccgcgtccaacaactcggtagacgacatcaggagcctcattgatcaggtc
cggattccgccgcagaccgggcaattcaaggtgtatatcatcgacgaggtgcatatgctt
tcatcggccgcattcaatgccttcctgaaaaccctggaagagccgccgaagcacgccatc
tttattttggctacgaccgaaaaacacaaaatcatcccgaccatcctatcgcgctgccag
atttttgattttaagcgcattaccgtgaaggacgccaaggaacatcttgctgaagtggcc
aaaagtcagggcgtgtcctatgaagacgacgcgctgcacatcatcgctcaaaaggcggac
ggtgccatgcgcgatgcgctgtcgatttttgaccgtgtcgtgtcctattgcggaaacaac
ctgacgcgacaggccgtaacggaaaacctgaacgtactcgactatgaaacctacatcaat
gtcactgagctgatcattggcaaccagattccggaattgcttgtcgcctacaatgacatc
ctttctaaaggtttcgacggacaccattttatttcgggactggcttctcatttcagggac
ttgctggtatgcaaaaatcccgcaacgctgtcgctgcttgaagcgggggaacaggcccag
aaaatgtacggtgcgcaggctgcaaaatcaccacaggacttcctgctcaaggcgattgag
gtggccaacgactgcgacctgaaatacaaagtatcgcaaaaccagcgcctgctcgttgaa
ttgtgcctgatgcaactcgcctccatcactttcgatggagaaaaaaaaaagctgacggat
atataa

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