Francisella marina: F0R74_01425
Help
Entry
F0R74_01425 CDS
T06206
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fmi
Francisella marina
Pathway
fmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0R74_01425 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmi03019
]
F0R74_01425 (pnp)
03016 Transfer RNA biogenesis [BR:
fmi03016
]
F0R74_01425 (pnp)
Enzymes [BR:
fmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F0R74_01425 (pnp)
Messenger RNA biogenesis [BR:
fmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F0R74_01425 (pnp)
Transfer RNA biogenesis [BR:
fmi03016
]
Prokaryotic type
tRNA degradation factors
F0R74_01425 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
WHD_LYAR
RecX_HTH2
Motif
Other DBs
NCBI-ProteinID:
QEO56565
UniProt:
A0ABX5ZE79
LinkDB
All DBs
Position
291732..293813
Genome browser
AA seq
693 aa
AA seq
DB search
MKIFREVFELGNKEIVLETGGMARQADGSVTVSCGNNVVLVTTVVKKSVSAGADFFPLSV
HYLEKTYAAGKIPGGFLRREGRPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVLSYD
GTFSPDMLALIGASASLAISGAPYDDIIAGVRVGYTNGKYILNPNKADLKESDLDLVVSG
TDDAILMVESEANSLPESVMLGGILYAHKHLRTIISSINKLAKVASKPRIEYTIYEINKL
LKSQIKSHFFGEIKNAYTIASKQERNIKLNEVRKNVLEHIFSSDVDGNEYTEKEILEAFH
DIEKDLVRSNILDGKPRIDGRCTETIRPINVKVGVLPGVHGSALFTRGETQALVVTTLGS
DRDAQLVESLDGMEKSRYMLHYNFPPYSVGECGMVGMAPKRREVGHANLAKRATQAVFPN
ETAYPYVVRIVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGAKYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISREILEQALEQARTGRLHILGIM
NEVIREHKESVSDVAPQIHVMNINPAKIKDVVGRGGSVVKGIVEKTGAQIDTSDSGEVKI
FAKDKKSLDLAKSIVEEIVAEVEEGQIYKGKIVKLLDSGAFVNLLGSQDGYLPFSEIEQA
GMKTNSLVEGQGLEVLVQNIDRGGRVKLSLVAR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatatttagagaagtctttgaactaggtaacaaagaaatagttctagaaacaggt
ggtatggctcgtcaagcagatgggtctgtgactgtaagttgtggtaataatgttgtattg
gtaactacagtagttaaaaaatcagtatcagcaggtgctgatttctttccattgtcggta
cactatttagagaaaacatacgcagcaggtaagatacctggaggcttcttaagaagagag
ggaagaccttctgaagaacagattcttatttctagattaatagacagatctataagacca
tcatttcctgatggattttttaatgagattcaaattgtagctacagttttatcttatgat
gggacattttcaccagatatgttggcactaataggagcatctgcttctttagcaatatca
ggagcgccttatgatgatattattgctggtgtaagagttggttatactaatggtaagtat
attcttaatcctaataaagcagatttaaaagagtctgatcttgatttagtagtttctggt
actgatgatgcaatactaatggtggagtcagaagctaatagtttgccagaatctgtgatg
cttggtggtatcttatatgcacacaagcatcttagaactattattagctctattaataaa
cttgctaaagtagcttcaaaaccacgtatagaatatacaatttatgagataaataagttg
ttaaaatctcagattaagtcacatttctttggtgaaatcaaaaacgcatatacaatagca
tctaagcaagagagaaatattaagcttaatgaagtaagaaaaaatgttttagagcatata
ttctcgagtgatgttgatggtaatgaatatactgaaaaagaaattttagaagctttccat
gatattgaaaaggatcttgttagatcaaatattttagatggtaagccaagaattgatgga
agatgtacggaaacaatacgacctatcaatgttaaagttggtgtattgccaggcgtgcat
ggttcagctctatttactagaggtgaaacacaggctttagtggttacaaccctcggtagc
gatagagatgcccagcttgtagaatctttagatggtatggaaaaatcacgatacatgctt
cattataactttcctccatactctgtaggggagtgtggtatggtgggtatggctccgaag
cgtcgtgaagttggtcatgcaaatctagctaaacgtgcaacacaagcggtttttccaaat
gaaactgcttatccatacgtcgtaagaatagtatcggaaatattggagtcaaatggctct
agttccatggcaactgtttgtggctcatctttatctatgatggacgcaggtgtgccaata
gctgagccagttgcaggtattgctatgggtcttatcaaagatggcgcaaaatatgcagtt
ttatcagacatattaggtgatgaagatcatttgggagatatggatttcaaagttgctggt
actagatatggtgttacagcacttcagatggatatcaaaatcaaaggcatctctagagag
attcttgagcaagcacttgagcaagctagaacaggtaggttgcatatcttagggattatg
aatgaagtaataagagagcataaagaatctgtttctgatgttgctccacaaattcatgtc
atgaatataaacccagctaagataaaagatgttgttggtcgaggcggatctgttgtaaaa
ggtatcgtagaaaaaactggagctcaaattgatactagtgactctggtgaggttaaaata
tttgctaaagataaaaaatcattagatttggctaaatctatagttgaagaaattgttgct
gaagttgaagaaggacaaatttacaagggtaagattgttaagcttttagactctggcgca
tttgttaatcttcttggtagtcaagatggatatttaccattctcagaaattgaacaagct
ggtatgaaaactaattcattagtcgagggtcagggcttagaagtcttggttcaaaatata
gacagaggtggtagagttaaactttctcttgtagcgaggtaa
DBGET
integrated database retrieval system
