Francisella marina: F0R74_01460
Help
Entry
F0R74_01460 CDS
T06206
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fmi
Francisella marina
Brite
KEGG Orthology (KO) [BR:
fmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fmi03009
]
F0R74_01460 (rlmD)
Enzymes [BR:
fmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
F0R74_01460 (rlmD)
Ribosome biogenesis [BR:
fmi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F0R74_01460 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
RrnaAD
TRAM
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_15
DOT1
PCMT
Methyltransf_4
Ubie_methyltran
Cons_hypoth95
Pox_TAP
N6_N4_Mtase
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
QEO56571
LinkDB
All DBs
Position
296814..298163
Genome browser
AA seq
449 aa
AA seq
DB search
MGRSRRYKKPQEGIFEGEIIALSHDGRGIAKINGKTTFIPFTLPGEVVKFEYTFTKAKFD
EAKVVEYIKKSSNRVNPPCEHFEMCGGCSLQHMSTDAQIEHKQQTLLNQLKYIGQGVEPQ
NVLEPLCTAKTEGYRNKARLGVRYVNKKGKILVGFRERNGRFLADIDKCIVLNPLVGEKL
TEIASFIETLSIYQHIAQLEIAIDDARPALIVRHLEPFVNEDLEKLKAFGLENGYWIYLQ
SKGPDTIYRLYPQEDVEPKKLSYQPVTGINIGFEPNDFTQVNNDINRKMIKRAIDLLEIS
ENDSIIDLFCGLGNFTLPISQYAKTVIGVEGEQTMVSRAKETAISNSINNVKFYAANLFE
SFEDKEWFNNFEYNKMLLDPPRAGAQEVCSNIEKFDVERIVYVSCDTATLARDAGVLVND
KGYKLVSAGVMDMFPHTMHVESIAVFEKV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatctagaagatataagaaacctcaagagggtatctttgaaggtgaaattata
gctctcagccatgatggtagaggaatagcaaagattaatggtaaaacaacttttattcca
tttacactgcccggtgaagtagttaagtttgagtatacattcacaaaagcaaaattcgat
gaagcaaaggtagttgagtatattaaaaaatcatctaatagagttaaccctccatgtgaa
cattttgaaatgtgcggtgggtgtagtttgcaacatatgtctacagatgctcagattgag
cacaagcagcaaactttgctaaatcagctaaaatatattggtcagggtgtagagcctcag
aatgttttagaaccattatgtacagctaaaaccgaagggtatcgtaataaagcacgttta
ggtgttagatatgtcaataaaaagggcaaaattttagtaggctttagagaacgtaatggc
agatttttggctgatatagataaatgtatagtcttaaatcctcttgtgggagagaaatta
acagaaattgcctctttcatagagacactttctatatatcagcacatagctcaattagag
attgcaattgatgatgctagaccagcgcttatcgtgcgccaccttgaaccatttgtgaat
gaagatctcgaaaagctaaaagcttttggtttggaaaatggctactggatatatctgcaa
tcaaaaggtcctgatactatctataggctatatccacaagaagatgttgagcccaagaag
ttaagctatcaaccagttacagggataaatatcggttttgagcctaatgattttactcaa
gttaataatgatattaatagaaagatgattaaaagagctattgatcttttagaaatatca
gaaaatgattctattattgatttgttttgtggtttaggaaactttacgttgccaatttct
cagtatgcaaaaacagtaattggcgtagaaggtgagcagacaatggttagtagagctaaa
gaaacagctattagtaatagtattaataatgttaaattttatgcagctaatctttttgaa
agtttcgaagataaagagtggtttaataattttgaatataacaaaatgcttttagatcca
ccgagagctggggctcaagaagtttgtagcaatattgaaaaatttgatgttgagcgtatt
gtttatgtgtcatgtgatacggctactttagccagagatgctggagttttagtaaatgac
aaaggctataagctagttagtgccggagtcatggatatgtttcctcatactatgcatgtt
gagtcaatagctgtttttgagaaggtataa
DBGET
integrated database retrieval system
