Francisella marina: F0R74_05575
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Entry
F0R74_05575 CDS
T06206
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fmi
Francisella marina
Pathway
fmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F0R74_05575 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmi03400
]
F0R74_05575 (recB)
Enzymes [BR:
fmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F0R74_05575 (recB)
DNA repair and recombination proteins [BR:
fmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0R74_05575 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_12
HPD
Motif
Other DBs
NCBI-ProteinID:
QEO57349
LinkDB
All DBs
Position
complement(1139669..1143307)
Genome browser
AA seq
1212 aa
AA seq
DB search
MTNLDANTITLQGRHIIEASAGTGKTFNITELYIRLLLEQRLGSRLLPKDILVMTFTKDA
TQEVIGRVEAKIRDVLEDISESKEVKVSIKGRDTLIQKGDENYKHLKRSLLEIDEAAIFT
IHGFCKKVLSEQAFASGIEMDVSMEVDTSDILQKVVEDFFRKYINKNKTKFEYLQAYKLH
TPDKFLDKLRNIVRSSYEILADTFERETEKLAKEKQQVFVNLEANKSFIFESLIIKHKDK
NKRIEEWQIIENWTNDSQLSLMPKEVSAFINGNRYRGRDDIAEVFEEIKALKDKYSKIKD
IDEYKKQFDAAQFIKQAYLKIRQDFIKAKEQKGVLDFDDLITKLCQSVKKSPDLVKTLQH
QYPVALIDEFQDTDAEQYEILDTIYPLKNSSHSHEGGNLLTNGLNLKDTLLREYDSSSDQ
NDSNLLLLMIGDPKQAIYGFRGGDIFTYLKAKDSCSSDNQWSMDTNWRSTSEMIKAYNRL
FYKKDYEPKDEGELGANIFSDGIGYQLVKASPKANEKAKDFDDNLKPINYFYYQVAEDDN
KSDIDSNLSVWTANEIVRLLNSKKVVESDIAILVENGKQAKVIQKALQAKKLSSVYLSQR
DNVYHSQEATEILALMEGVNDLENKSMLKRALSTSLLGGRADKFISYIDENDVSAWDEEI
EKAKSLRQQWHKYGFMAFIMQVIHQNFTQRSDSKERVITNILHLAELIKVAENKYKHPNQ
LIKWYRQQLNSTATSEGELRLESDDNLIKIITIHGSKGLEYSVVFIPFASYVSKKKFEAS
DFSKYYDKHLKQTVYKIGKDDSIKPQIENEVIEELMRLFYVAVTRAEHRCYIGIAKYSNS
EKSPLARFLDYQKDDDWLEKIQIITNNPVNQSSLIDVATSHCYESENLITNDQFDHDTLQ
NLKANDINKLANDNWEMLSFSKISKSKVQNTALEKENDESEDDSAQKSQQELEFRFTAPK
GADIGNILHNVLEHTDFSLGKIDENLLKEQMDRYKVVAAEDFDKLKVWLEECLVASIPSI
ETADFSSNDIQYGLFDIKDKGFCLKDIPNTKTLKEAEFYFPISNEKLYKKNIIEILAEYR
NQIIDYDEFSSQKIFGMLHGFIDLIFEYDGKFYVADYKSNYLGSTLEDYNQAAMSEKNQS
SFYDLQYLIYSVALDKYLRQNIESYNYEKHFGGVYYFYLRGMKDGYGVYRARPTLEIINK
IANLFNGDDYHV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgactaatctagatgcaaacacaataactttacaaggtcgacatattatcgaggctagt
gcaggtactggtaagacttttaatattacagagttatacattcgtttacttcttgagcag
aggttaggaagtagattattacctaaagatatccttgtaatgacatttaccaaagatgct
actcaagaggttatcggtagagtggaagctaagattagagatgtattagaggatatttct
gaaagcaaagaggtcaaagtttctataaaaggacgagatactctgattcaaaaaggtgat
gagaattataagcatctaaaaagatcattacttgagatagatgaggcagctatatttact
atccatggtttttgtaaaaaagtcttaagtgagcaagcttttgctagtggtatcgagatg
gatgtctctatggaggtcgatacttcagatattttgcaaaaagtagtagaggattttttt
agaaaatatatcaataaaaacaaaaccaaatttgaatatttgcaggcttataagctacat
actccagacaagtttttggataagctaaggaatattgttaggtctagttatgagatatta
gcagatacttttgagcgagagacagaaaaattagcaaaagagaaacaacaggtttttgta
aatttagaagcgaataaatcttttatatttgaaagtcttataatcaaacataaagataaa
aacaaaagaattgaggaatggcaaattattgagaattggactaacgatagccagcttagt
ttaatgcctaaagaagtatcagcttttataaatggtaatcgttatcgtggtagagatgat
atcgctgaagtttttgaagaaattaaagcattaaaagataagtattcaaaaattaaagat
atagatgagtacaagaagcaatttgatgcagcccaattcatcaaacaagcctacctaaaa
atccgccaagattttataaaagcaaaagagcaaaaaggtgttttagacttcgatgattta
attaccaagctttgtcaaagtgttaagaaatctccagatttagtcaagactttgcaacat
caatatccagttgctcttattgatgagtttcaagatacagatgctgagcagtatgagatt
ttggatactatttaccctttgaagaatagtagtcattcccacgaaggtgggaatcttctt
acgaatggattaaatttaaaagataccctcctacgcgagtatgacagtagctctgatcag
aacgatagcaatcttctgctcctaatgataggagatccaaagcaggcaatctatggtttt
agaggcggagatatcttcacatatctaaaggctaaagatagttgctctagtgacaatcag
tggagcatggatactaactggcgttcaactagtgagatgataaaggcttacaatagactt
ttttataaaaaggattatgaaccaaaagatgagggtgagcttggagctaatatctttagt
gatggtattggctatcaacttgttaaagcatcaccaaaggcaaatgagaaagcaaaagac
tttgatgataaccttaaaccaataaattatttctattatcaagtggctgaagatgataat
aaaagtgatatcgatagtaatttatcagtatggactgctaatgagattgtcaggctatta
aattctaaaaaagttgtagaaagtgatatcgcaattttggtagagaatggtaagcaagca
aaggttattcaaaaagctctacaagctaagaaactaagctcagtatatctaagtcagcgc
gataatgtctatcatagccaagaggctacggagatattagctcttatggagggtgtaaac
gatcttgaaaataaatctatgctaaaaagagcgttatcaactagtttacttggtggtaga
gctgataaatttattagttatattgatgaaaatgatgtctcagcatgggatgaagagata
gaaaaagcaaaatctctaagacaacaatggcataaatatggttttatggcatttattatg
caagttatacatcagaacttcactcaaagatcggattcaaaagaacgtgttatcacaaat
attctccatttagccgagcttataaaagtggctgagaataaatataaacacccaaatcag
cttattaaatggtatcgccaacagctaaatagtacagctacaagtgagggcgaacttcga
ttagagagtgatgataatctgattaagataattacaattcatggctctaaagggcttgag
tactcagttgtatttataccatttgcaagttatgtaagcaaaaagaaatttgaggcgagt
gatttctctaaatactatgataaacaccttaaacagacagtctataaaattggtaaggat
gatagtataaaaccacaaatagaaaatgaagttatagaggaattaatgcgcctgttttat
gtggctgttacacgtgcagagcatagatgttatattgggattgcaaaatatagtaatagc
gaaaaatcaccattagcaagattcttagattatcaaaaagatgatgactggttagagaaa
attcaaataatcacgaataatcccgttaatcaaagttcgcttatagatgtggctacaagt
cattgttatgaaagtgagaatttaattacaaatgaccaatttgaccatgatactttacaa
aacctcaaagcaaatgatattaacaagttagcaaatgacaattgggagatgctgtctttc
tcaaaaatatccaagtcaaaagttcaaaatactgcattagaaaaagaaaatgatgagtct
gaagatgatagtgcccaaaaatctcagcaggaattagagtttagatttacagctcccaaa
ggagcagatattggtaatattttgcataatgttttagagcatacggattttagcctaggc
aagatagatgaaaatcttttaaaagagcaaatggatagatacaaggtagttgctgcagaa
gattttgataagcttaaagtatggttagaagagtgtttagtcgcgtctataccttctata
gaaactgcagattttagttctaatgatattcaatatggtttgtttgatatcaaggataaa
ggcttttgtttaaaagatattccaaatacaaaaaccttaaaagaagcggagttttatttt
cctatatcaaatgaaaaactatacaagaaaaatattatagagattttagcagaatatcgt
aatcagattattgattatgatgagttttctagtcaaaagatttttggtatgcttcatggt
tttattgatttgatttttgaatatgatggtaaattttatgtggcagattataagtcaaat
tatcttgggagtactctagaagattataatcaagctgctatgagtgagaaaaatcaaagt
agcttttatgatttacagtatctaatatatagcgttgccttggataagtacctgcgacaa
aacattgaaagttataattatgagaagcattttggcggagtatattatttctatcttaga
ggtatgaaagatggttatggggtttatcgagctagaccaactttagagattattaacaaa
attgctaatctatttaatggggatgactatcatgtataa
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integrated database retrieval system
