Francisella marina: F0R74_09065
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Entry
F0R74_09065 CDS
T06206
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fmi
Francisella marina
Brite
KEGG Orthology (KO) [BR:
fmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fmi03016
]
F0R74_09065
Enzymes [BR:
fmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F0R74_09065
Transfer RNA biogenesis [BR:
fmi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F0R74_09065
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
FAD_syn
TetR_C_19
Motif
Other DBs
NCBI-ProteinID:
QEO57992
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Position
1864264..1866138
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AA seq
624 aa
AA seq
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MLLENQSIKNALVIFKSKPAKVVEILDKKIEIETLDSKNIKLPAKNVQILTVVDHDFDLD
KLERLEIPELELTWELLQEQQQTSIDELSELLFESVGANQAYTVWLLVSEGEYFSFNDDF
TINIHTQEQKDQVVRDKHEKLKKEQELNDFIERLNNKTFNVEDTKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPYLYRYGAELESNTTDFKYNSESDSQRAD
LTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEARARGSNLYV
PEHIITMLPPHATQKLGLGLQEVSPALSVGFRIDESGDIHDIEICFSNIKVTRYSYEFVE
ENISNLELGEIEVYAKYFTDKRLAKGAVELDFPEIKILLDNDKNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLKQDDLENIDSIADMFATRKKLQRGKYSTE
PDVHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMISIDDVDNIIAQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQAAVIEKLDKGRLMVSIADLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEES
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaaatcagagcatcaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaactttagatagtaagaatata
aaattacctgcaaaaaatgttcaaatacttacagttgtagaccatgatttcgatttggat
aagcttgagagattagaaattcctgagttagagttaacatgggaattattgcaagaacag
caacaaacgtctattgatgaattaagtgagcttctttttgaatccgtaggagctaatcaa
gcttatactgtatggcttttggtttcagagggagagtattttagctttaatgatgacttt
actatcaatattcatacacaagagcaaaaagatcaagtagtcagggataaacatgagaag
ctcaaaaaagagcaagaactaaatgattttatagaacgtctaaataataagacttttaat
gtcgaagacacaaagttccttaaagagatagaggctttagcaacacttaaaagtacaaaa
tgtcgtttctttaaatatttaaatatggaagagtctgagaatagtgcgtataagctactc
ttggatattggttattgggatgaattctttaacccttatctatatcgatatggtgcggaa
ttagaaagtaatactactgattttaagtataattctgagtcagatagtcagcgtgctgat
ctaacacatctgactgcctatgctatagatgatgagggtagtaatgatcctgatgatgca
attagttgggatgctcaacaaaataaaatgtgggttcatatcgctgacccttcttctagc
attagttttggagatgaagtagatcttgaggctagagcacgaggttctaatttatatgtg
ccagagcatataattacgatgttgccacctcatgcaacacaaaagttaggtttaggccta
caagaagtttctccagctttgtcagtaggatttagaattgatgagtcgggtgatattcat
gatattgagatatgttttagtaatataaaagttactagatattcttatgagttcgttgaa
gaaaatatctctaatctagaacttggagaaatagaggtttatgctaaatatttcactgat
aagcgtttggcaaaaggagcggtagaacttgattttcctgagataaaaatattattagat
aatgataagaatgtcaaactaactgacttaccacgcttaaactcaagaacattggtacgt
gatactatgctaatggctggagttgcgattggacagttttgtaaagaaaataatatttgt
gtacctttttcgacacagccagagcatgatcttaaacaagacgatttagagaatattgac
tcaatagctgatatgtttgcaacacgtaaaaagctccaaagaggtaaatactctacagaa
cctgatgttcacgcaggtatgggtttagattcttatgtacaagtgacaagtcctctaaga
agatatttagatttacttgttcattatcaattacgtaatttcttagaaaataagcaaatg
attagcattgatgatgttgataatataattgctcaagtagatattcctattaagtcaaat
agacaaacggagcgtttttctaattctcattggaaattagtctatctaatgcagaatcct
aatttagagttccaagcagcagttattgaaaaattagataaaggtcgtttaatggtttct
atcgcagatttagcgatgactaaaaaacttgctgttagtggtaagtacgatttaaatgat
caaataaaattacaaaacacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagagttaa
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