Fidelibacter multiformis: FMIA91_01420
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Entry
FMIA91_01420 CDS
T10786
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fml Fidelibacter multiformis
Pathway
fml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FMIA91_01420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fml03019
]
FMIA91_01420
03400 DNA repair and recombination proteins [BR:
fml03400
]
FMIA91_01420
Enzymes [BR:
fml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FMIA91_01420
Messenger RNA biogenesis [BR:
fml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FMIA91_01420
DNA repair and recombination proteins [BR:
fml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FMIA91_01420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
BFN36263
LinkDB
All DBs
Position
175491..177419
Genome browser
AA seq
642 aa
AA seq
DB search
MDILEKTLKERFHLPGFRPLQRDIIEGILEGKNVIAVLATGGGKSLCFQLPALLIGRLTL
VITPLVALMEDQVKRVMELGIAGTYISSVLDEEEKRSRLRCLARGEYQILFIAPERLPSK
SLNQALQYCPPYFIAIDEAHCISQWGHDFRPSYMEIGPFVQRYMIPYRAAFTGTATRETI
EDMKRSLGWEKALVLKATFDRPNLKYMAYSFKNSLLKRNALKRILRGMRGAGAIYCSTRK
DVEQIHTMLRMWGADPCMYHAGLSPYLRKKSQADWISGRKPLMVATNAFGMGIDKGDVRF
VIHYQIPGNLENYYQEAGRAGRDRQDSFCILLYTAEDQEIQEFFLSGHTWDPLMLEDAFK
EKRIPENLPEYVKRVLSETLYPDETDIHRLRQDLKKLKVYASLQMEKFEKMKGYVLENRC
RRKAILDYFDEASSLKNCGGCDVCLSWSPDDLKTDYLVVKNDLRDEMDLARQLYSRFSTH
RFYVDAFHFRHRSMIRCILNHGEQNGLVREMIPGLWMTAPAFKRERSKDMGDLTLKNFPG
LIIRAKKVRKLVGQQRLETLVEMLPKWFLKGIGRKRYRKILETLVTEDEIRMLLFPLKES
VIEDVLKVFELPEGCLPPRKKHLSQLLACHGMAPEDQDLYLK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggacattttggagaaaacactgaaagaacgcttccatcttcctggtttcaggcctctc
cagcgtgacattattgaagggattctggagggtaaaaatgtgattgcggtgctggcaaca
ggcggggggaaatccctctgttttcaattgccggccttgctgattgggcgactcaccctg
gtaatcacacctttggttgcattgatggaagatcaggtgaaacgtgtgatggaactggga
atcgccggaacttatatttcttcggttctggatgaggaggaaaaaagatcccgcttacgg
tgccttgcccggggagagtatcaaatcctctttattgcaccggagcgattgccgtccaaa
tccctgaatcaagccctgcaatattgtccgccctacttcattgccattgatgaagcccac
tgtatttcccagtggggacatgatttcagaccctcctacatggaaataggtccctttgta
caacgttacatgattccgtatagggcggctttcaccgggaccgccacacgggaaacgatt
gaagatatgaaaagatctttgggatgggagaaagctctggtgttgaaagcgacttttgac
cggcccaatttgaaatacatggcgtattcatttaaaaattccctgctcaaacgcaatgct
ttaaaacggattttgaggggaatgaggggagctggtgccatatactgctcaacccggaaa
gatgtggaacaaatacacactatgctcaggatgtggggtgctgatccctgcatgtatcat
gccggtctttctccttatcttcggaaaaaatcacaggctgattggatttccggacgtaaa
cccctcatggttgccacaaatgcctttggtatgggtatagacaagggggatgtccgtttt
gtcatccactatcaaattcccggaaatctggagaattactatcaggaagccggccgggca
ggacgggatcgccaggattctttctgcattcttttgtatacggctgaggatcaggagatc
caggaattttttctgtcaggtcacacctgggatccccttatgcttgaagatgcctttaag
gaaaagcgaatcccggaaaaccttccggaatacgtaaagcgggttttatctgaaacgcta
taccctgatgaaacagacatacatcgccttagacaggatttgaaaaagctgaaagtatat
gcatcacttcagatggaaaaatttgagaaaatgaaggggtatgtattggaaaatcgttgc
aggagaaaagccatcctggattattttgatgaagcatcttccctgaaaaactgtggcgga
tgtgatgtgtgcctgtcgtggtctccggacgatttgaaaaccgattaccttgtggttaaa
aatgatttaagggatgaaatggatttggcacgacagctttactcccggttcagcacacac
aggttttatgttgacgcatttcatttcagacatcgatccatgattcgttgcattctgaat
catggcgaacaaaatggtctggtgcgggaaatgattccgggcctttggatgacggctcct
gccttcaaaagagaacgttccaaagatatgggtgatttgactttaaaaaactttcccggg
cttattatccgggcgaagaaagtccgaaagctggtaggacaacaacgactggaaaccctg
gtagaaatgcttccgaagtggtttctaaagggtataggccggaaacgttaccggaaaatc
cttgagacccttgtgacggaagatgaaattcgtatgcttctctttcccctgaaagaatct
gttattgaagatgttttgaaggtgtttgagctgccagaaggatgtcttcctccacgaaaa
aaacatctttctcagcttttagcctgccacggaatggcaccggaggatcaggatctttat
ctgaagtga
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