Fidelibacter multiformis: FMIA91_20980
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Entry
FMIA91_20980 CDS
T10786
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fml Fidelibacter multiformis
Pathway
fml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FMIA91_20980 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fml03021
]
FMIA91_20980 (rho)
03019 Messenger RNA biogenesis [BR:
fml03019
]
FMIA91_20980 (rho)
Transcription machinery [BR:
fml03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FMIA91_20980 (rho)
Messenger RNA biogenesis [BR:
fml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FMIA91_20980 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
BFN38219
LinkDB
All DBs
Position
2559751..2561040
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AA seq
429 aa
AA seq
DB search
MKTSKQAGNADNGTYRISELQEKTLKQLQNIAADFEVPGTQNMKKMELIFKILEAQAEIS
GNIFEEGVLEILPDGYGFLRSSRFHYLNSPYDLYVSPSQIKRFGLKTGHIISGQVRPPKD
NERFFALLKVESINFEDPEKAKMTRPFGTLTPLHPEERLSLERNPKDYSTRIIDLLSPIG
KGQRGLIVAQPKTGKTILLQKIANSILANHPEAMLIVLLIDERPEEVTDMQRNVDAEVVS
STFDEPPERHVQVAEMVLQKARRMVEFGHDVVILLDSITRLARAHNSVVPHSGKILSGGI
DSNALHRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDDVIFEEFKGTGNMELVLDRRL
SDRRIFPAIDINRSGTRKEELLMSKAELARVWILRKFLNEMSPVEAMEFLLDKMSASRTN
KDFLRNMNS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacaagtaaacaagccggcaatgctgacaatggaacctatcgcatatcagaattg
caggaaaagaccctgaagcaattgcaaaacattgctgccgattttgaagtccccgggact
cagaacatgaaaaagatggaattgatttttaaaatcctggaagctcaggctgagatttcg
ggaaatatttttgaagagggtgttttggaaattcttccggatggttacggatttctccgg
agcagccggtttcattatttgaacagtccttatgatttatatgtctcaccttctcagatc
aagcggtttggtttaaaaacggggcacattatcagtgggcaggttcgtccgcccaaggac
aatgagcgattttttgccttattaaaggtggaatcgataaactttgaagatcctgagaag
gccaagatgacccgtccctttggaaccctgacacctttgcatcccgaagagcgcctgagc
ctggaacggaatcccaaagattactccacccggattatcgatttgttatcgcccatcggg
aagggtcagcgcggacttattgtcgcccagcctaagacagggaagaccattcttttgcag
aaaatcgccaacagcatattagccaaccatccggaagcgatgctgattgtgcttcttatt
gatgaacggccggaggaagtgacggatatgcagcggaatgtcgatgctgaagtcgtgagt
tccacctttgatgaaccgccggaacggcatgtccaggtcgctgaaatggtgttacaaaaa
gcccggcgcatggtggaattcggtcatgatgtggtcattcttctggattcgatcacccgc
ctggctcgtgcccacaattccgtggtgccccactccgggaaaatcctctccgggggtatt
gacagcaacgcactgcaccggccgaaacgctttttcggtgcagcccggaatattgaggaa
ggaggcagcctgaccattattgctactgccctcattgatacgggaagccggatggacgat
gtgatttttgaggaattcaagggaaccggtaatatggaactggttctggaccggcgcctt
agtgaccgccggatcttcccggccattgatattaaccggtcaggaacccgtaaggaagaa
ctcctgatgtccaaagccgaactggcccgggtgtggatcctgagaaaattccttaatgaa
atgagtcccgtggaagccatggagtttctcctggataagatgtccgcctcccggacaaat
aaagacttcctgcgaaatatgaattcctga
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