Fidelibacter multiformis: FMIA91_22670
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Entry
FMIA91_22670 CDS
T10786
Name
(GenBank) hypothetical protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fml Fidelibacter multiformis
Pathway
fml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FMIA91_22670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fml03400
]
FMIA91_22670
Enzymes [BR:
fml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FMIA91_22670
DNA repair and recombination proteins [BR:
fml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
FMIA91_22670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
UB2H
RecG_dom3_C
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BFN38388
LinkDB
All DBs
Position
complement(2779335..2782463)
Genome browser
AA seq
1042 aa
AA seq
DB search
MDMTLIQTFRNTPAYTALFHRLMRDKHIWAEAQVLSFVAFLSRSLSEDGLFPVLLLESER
ESEKMLEACVSFFPDDTVVWLPFYDFGTELYNHARFENHFARYASRLTRNNLSCVIASPD
LLSHPVQNPAAPSVSGFSLSEGQALSFEWLTQRLSDLGYERTELVEHPGEFCIRGGIVDV
YPFGSPLPQRLEFFGDTLESIRSFNPDSQLSVNTEKHLRLFPSSGSFSPRSPFIDQLPET
TVLINLSGRSVPINKALLSITFSPVSDEDSFKALPLPPFQAGTSRDAHIVRFVRDLNTVV
LFWQSSLLKDRLEKLFHACENVHFIQGSLPEAFLLKDLQAAFLNDTYFFQKEHLFNPDAP
FIPDVERVPRRDILKYGEAVVHVDYGIGIYLGTRFSDGDEQLILEYDQEDRVYLPVRHID
KIYRFSEGHAHPPQPDSLKRKTWEPKKQRAKKSAAYVTDELLKLYRKRASRKGLAMDGEP
VSEKELALSFPWPETRDQGVAIKTVKEDMAKPLIMDRLICGDVGFGKTEVAIRAAFRAVL
SGYQVAVLVPTTILSIQHYETFRERLSPLGVSVNILNRFRTDREFKTLRESVVQGKTDIL
IGTHRILSNKLFFKNLGLLIIDEEHRFGVRHKEKIQSIRSNVDVLTLSATPIPRTLQLSH
SGIRDILRIDTPPKERIPIYTKVIHWDSDLIRQVLRDELKRGGQVLVVENNIRELEPLTH
NLEMLVPEARIRFAHGQLTGKILENQLIDFFHHQYDVLVSTTIIESGIDIPNANTLIVMN
AHRFGLSQLYQIRGRVGRSFRKAYAYLVIPRHRHINPDAMQRLKALEFYTDLGSGYHIAM
RDLELRGAGNLFGTEQSGHIDQVGYRYFLKLLTDEIELRTHRKSPLQTQPDISLSLRAFL
PPSYIPSGTIRLELYQSIAAAEKEEDVQTLYKELRDRFGPPSPEALNLLRLRQLYLLARR
LGIESITQLTQYTSLVFNPHIPHDILQKIALSMIPVLKELEIPHSFHTKGNFSIRIHLDK
GKETEVLKMLLESVTNKNKFEF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggacatgactctgattcaaacattccggaatacgccggcttataccgctttattccac
cgcttaatgagggataaacacatttgggctgaagcccaggttctttcttttgtcgccttt
ctttcaagatcgttgtcagaagatggccttttccccgtccttctcctcgagtccgaacgg
gaatcggaaaaaatgctggaagcctgtgtatccttttttcctgatgacacggttgtttgg
ctcccgttttatgattttggcacagaactttataaccatgcccgctttgagaatcatttt
gcccgctatgcctcacgtctcacccgaaacaacctctcctgtgtaatcgcttctccggat
cttctttctcacccggtacaaaatcctgcagccccttccgtttccggcttttccctttcc
gagggtcaggccctttcttttgaatggcttacacaacgcctttcagatttgggatatgag
cgaacagagctggtggaacatccgggagaattctgcattcgtggcgggattgtcgatgtg
tatccctttggctctccccttccccaacgactggagttttttggagacacccttgaatcc
attcgctctttcaatcccgattcccagctctcggtcaacacggaaaaacatctccggctt
tttccttcttccggatctttttctccccgttcaccctttatcgatcaattaccggaaacg
acagtccttatcaatctttcgggccgttccgttcccatcaacaaggcccttttgtccatt
accttttcgcctgtttctgatgaagactcctttaaggctttacctcttccgccttttcag
gcagggacttcaagagatgcacatattgttcgctttgtccgggacctgaatacggtggtc
cttttctggcaaagttccctactgaaagatcggctggaaaagttgttccatgcctgtgaa
aatgtacattttattcagggaagccttcctgaggcgtttctcctgaaagatctccaggca
gcttttttaaatgacacttacttttttcagaaagagcaccttttcaaccccgatgccccc
tttatacccgatgtagaacgggttccccgccgggatattttgaaatacggagaagctgtt
gtccacgtagattacggcatcggcatttatctgggcactcgcttttcagacggagatgaa
cagctgattcttgaatacgaccaggaagaccgtgtttacctgcccgtcagacacatcgat
aaaatctatcgtttctccgaaggtcatgcccatccgccccaacccgattctctgaaacga
aaaacatgggaacctaaaaaacaacgggcaaaaaaaagtgccgcttatgtaacagatgaa
ttgcttaagctgtaccggaaaagggcctcccgaaaaggacttgccatggacggagaacct
gtgtctgaaaaagaactggccctctccttcccctggccggaaacgcgggaccagggcgtg
gccatcaaaacagtcaaagaggatatggccaaacccctgattatggatcgcctgatctgc
ggtgatgtgggcttcggaaaaacggaggtcgctatccgggcagccttcagggccgttctt
tccggctatcaggttgccgtccttgtgcctacaaccattttgtccattcaacattacgaa
actttccgggaacgcctttctcctttgggagtatccgtaaatatcctgaaccgcttccgc
acagatcgggaatttaaaaccctgcgtgaatctgtcgttcaggggaaaacagatattctg
atcgggacacatcgaatactgtctaataagttgttttttaaaaacttagggcttcttatc
atcgacgaagaacaccgtttcggtgtccgccataaagagaaaattcagtcgatacggtcc
aacgtggatgtgctgaccctcagcgcaactcctattccccggacgcttcagttgtcccac
tcgggaatccgggacatacttcgcatcgataccccgcccaaagagaggattccaatttat
acaaaagtgattcactgggactctgatcttatccgccaggttctccgggacgaattgaaa
aggggtggacaggttcttgtggtagaaaataatatccgcgaattggagcccctgacacac
aatctagagatgctggtccccgaagcaagaatccgttttgcccacggacaactcacgggc
aaaatccttgagaaccaactgattgacttctttcaccatcaatatgatgttctcgtaagc
acaacgatcatcgagtcgggtatcgacatccccaatgccaacaccctgattgtcatgaat
gcgcaccgattcggattatcccaattgtatcaaattcgcgggcgggtcgggcgttctttt
cgaaaagcatacgcttacctggtaatcccccggcaccggcacatcaatccggacgctatg
cagcgtttaaaggcgttggaattctataccgatttggggtccggatatcatattgccatg
cgggatctggaactacggggtgccggaaatctctttggaacggagcaaagcggccatatt
gaccaggtgggatatcgttactttttaaaacttctgacggatgaaattgaattgcggacc
caccgaaaatcccccttgcagacccagcccgatatttctctctccctgcgggcttttctg
ccgccatcctatattccatcagggacaatccgcctggaattgtatcaatccattgcagct
gccgaaaaggaagaagatgtacaaaccctttacaaagaattaagggaccgcttcggaccg
ccttcgccggaagccctgaatctccttcggctcagacaactgtatctcctggccagaaga
cttggaatagaatcgatcacccagcttactcaatatacaagccttgttttcaatccccat
attccacacgatatccttcaaaaaattgccctttccatgattcctgttctcaaagagctg
gaaattccacattccttccatacaaaggggaacttttcgatccgcattcatttggataaa
gggaaagaaacagaggtcctgaaaatgctgttggaatcggtaacgaataaaaataaattt
gagttttaa
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