Fulvivirga maritima: LVD15_01440
Help
Entry
LVD15_01440 CDS
T09268
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fmm
Fulvivirga maritima
Pathway
fmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVD15_01440 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmm03019
]
LVD15_01440 (rny)
Messenger RNA biogenesis [BR:
fmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LVD15_01440 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
DUF4954
HD_5
AIG1
Motif
Other DBs
NCBI-ProteinID:
UII27117
LinkDB
All DBs
Position
310933..312498
Genome browser
AA seq
521 aa
AA seq
DB search
MAEIIYVILAGVVGLGIGIMIGKSLINKINAQKELEIEEKAKSIVKEAELSAENIKKNKI
LEAKEKFLKLKAEFEEEASKKKNIIITNENKLKQREQHLSKEFEQVKRKESEIKELKDKL
AAQIDVVNNKKVELDKFNQQKVAILEKISNLTAEEAKEQLVESLKDEAQTKASSFIKDIL
EEAKLSATKQARKVVLETIQRTATEHAIENCVSIFNIESDDIKGKIIGREGRNIRALEAA
TGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVVDGRIHPARIEEIVAKTKKNIEEEI
IEIGERTVIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMASELGLSPK
QAKRAGLLHDIGKVWPDEPEKPHAIIGMELAQKYKEHPVVCNAIGAHHDEIEMTSMIAPI
IQACDAISGARPGARREVMESYIKRLKELEQLALSFDGVHKCYAIQAGRELRVMVDADNV
SDDRAGQLSFDISQKIEKDMQYPGQIKITVIREMRSVAYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaataatttatgtaatactcgcaggtgttgtcggcctcggtattggtataatg
ataggcaagtctcttattaataaaataaatgcccaaaaagagcttgaaattgaggagaag
gcaaaaagtattgtaaaagaagcagagctatctgccgaaaacatcaaaaagaacaagatc
ctggaagccaaagagaaattcttgaagctaaaagcggagtttgaagaagaggcctctaaa
aagaaaaacatcattataaccaatgaaaacaagctaaaacaaagagaacaacacctttca
aaagagtttgaacaagtaaaaagaaaagaatctgagataaaagagcttaaagataagctt
gctgctcagatagatgtggtgaataacaaaaaggtagaactagataagtttaaccaacaa
aaggtagccatccttgaaaaaatctctaatcttaccgcagaagaagctaaagaacaactg
gtagaatcactcaaagatgaagcccagaccaaagcttcatcattcattaaagacatttta
gaagaggccaaactttctgctaccaagcaggcaagaaaggtagtattagaaaccattcag
cgtactgctacggagcacgctattgaaaactgtgtttctatcttcaatatagagagtgat
gatatcaaaggtaaaatcattggtcgtgaaggccgaaacatcagagctttggaagctgct
acaggtgtagaaattatagtggatgacacccccgaggctatcatcatttcaggcttcgat
cctgtaagaagagaaatagccaggctatcattacaccgtttggtagtggatggccgtatt
cacccagccagaattgaagagattgtagccaagaccaagaaaaatatagaagaagaaatc
attgagataggcgaaagaacagtgattgaccttggtatccacggcttacaccctgaattg
attaagatggtgggtcgtatgaggttcagatcatcttacggacagaacttattacagcac
tccagagaagtggctaacttatgtgccaccatggcttcagagctaggcctaagccctaaa
caggctaagagagcaggcttacttcatgatattggtaaagtatggccagatgagccagaa
aagcctcacgcgatcataggtatggagctggcacagaaatataaagagcatccagttgtt
tgtaatgccattggcgctcaccacgatgagattgagatgacttctatgattgctccaatc
atccaagcttgtgatgccatatcaggtgcaaggccaggagccagaagagaagtaatggaa
agctatataaaacgcctgaaagagcttgagcagcttgcactaagctttgacggtgtacat
aaatgttatgcgatccaggccggtagagagctcagagtaatggtagatgctgataatgtg
agcgatgacagagcaggacagctttctttcgatatatcacagaagatagagaaagacatg
cagtacccggggcagataaagatcaccgtgatcagggaaatgaggtctgtagcttacgct
aaataa
DBGET
integrated database retrieval system