KEGG   Fulvivirga maritima: LVD15_01440
Entry
LVD15_01440       CDS       T09268                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fmm  Fulvivirga maritima
Pathway
fmm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fmm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LVD15_01440 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fmm03019]
    LVD15_01440 (rny)
Messenger RNA biogenesis [BR:fmm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LVD15_01440 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B DUF4954 HD_5 AIG1
Other DBs
NCBI-ProteinID: UII27117
LinkDB
Position
310933..312498
AA seq 521 aa
MAEIIYVILAGVVGLGIGIMIGKSLINKINAQKELEIEEKAKSIVKEAELSAENIKKNKI
LEAKEKFLKLKAEFEEEASKKKNIIITNENKLKQREQHLSKEFEQVKRKESEIKELKDKL
AAQIDVVNNKKVELDKFNQQKVAILEKISNLTAEEAKEQLVESLKDEAQTKASSFIKDIL
EEAKLSATKQARKVVLETIQRTATEHAIENCVSIFNIESDDIKGKIIGREGRNIRALEAA
TGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVVDGRIHPARIEEIVAKTKKNIEEEI
IEIGERTVIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMASELGLSPK
QAKRAGLLHDIGKVWPDEPEKPHAIIGMELAQKYKEHPVVCNAIGAHHDEIEMTSMIAPI
IQACDAISGARPGARREVMESYIKRLKELEQLALSFDGVHKCYAIQAGRELRVMVDADNV
SDDRAGQLSFDISQKIEKDMQYPGQIKITVIREMRSVAYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcagaaataatttatgtaatactcgcaggtgttgtcggcctcggtattggtataatg
ataggcaagtctcttattaataaaataaatgcccaaaaagagcttgaaattgaggagaag
gcaaaaagtattgtaaaagaagcagagctatctgccgaaaacatcaaaaagaacaagatc
ctggaagccaaagagaaattcttgaagctaaaagcggagtttgaagaagaggcctctaaa
aagaaaaacatcattataaccaatgaaaacaagctaaaacaaagagaacaacacctttca
aaagagtttgaacaagtaaaaagaaaagaatctgagataaaagagcttaaagataagctt
gctgctcagatagatgtggtgaataacaaaaaggtagaactagataagtttaaccaacaa
aaggtagccatccttgaaaaaatctctaatcttaccgcagaagaagctaaagaacaactg
gtagaatcactcaaagatgaagcccagaccaaagcttcatcattcattaaagacatttta
gaagaggccaaactttctgctaccaagcaggcaagaaaggtagtattagaaaccattcag
cgtactgctacggagcacgctattgaaaactgtgtttctatcttcaatatagagagtgat
gatatcaaaggtaaaatcattggtcgtgaaggccgaaacatcagagctttggaagctgct
acaggtgtagaaattatagtggatgacacccccgaggctatcatcatttcaggcttcgat
cctgtaagaagagaaatagccaggctatcattacaccgtttggtagtggatggccgtatt
cacccagccagaattgaagagattgtagccaagaccaagaaaaatatagaagaagaaatc
attgagataggcgaaagaacagtgattgaccttggtatccacggcttacaccctgaattg
attaagatggtgggtcgtatgaggttcagatcatcttacggacagaacttattacagcac
tccagagaagtggctaacttatgtgccaccatggcttcagagctaggcctaagccctaaa
caggctaagagagcaggcttacttcatgatattggtaaagtatggccagatgagccagaa
aagcctcacgcgatcataggtatggagctggcacagaaatataaagagcatccagttgtt
tgtaatgccattggcgctcaccacgatgagattgagatgacttctatgattgctccaatc
atccaagcttgtgatgccatatcaggtgcaaggccaggagccagaagagaagtaatggaa
agctatataaaacgcctgaaagagcttgagcagcttgcactaagctttgacggtgtacat
aaatgttatgcgatccaggccggtagagagctcagagtaatggtagatgctgataatgtg
agcgatgacagagcaggacagctttctttcgatatatcacagaagatagagaaagacatg
cagtacccggggcagataaagatcaccgtgatcagggaaatgaggtctgtagcttacgct
aaataa

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